PlantCAZyme

CAZyme Information

Basic Information
Species	Sorghum bicolor
Cazyme ID	Sb02g044020.1
Family	GT43
Protein Properties	Length: 378 Molecular Weight: 41336.6 Isoelectric Point: 9.6047
Chromosome	Chromosome/Scaffold: 2 Start: 77837940 End: 77842731
Description	Nucleotide-diphospho-sugar transferases superfamily protein
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

External Links

NCBI Taxonomy

Plaza

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT43	157	374	0
AHALRLVSPPVVWLVVESAREAGPTARLLRRTGVVYRHLTYGENFTSEAWEEERHHQRNQALAHIEQHRLRGVVLFAGLADVYDVRLLENLRHIRTVGAW PVATVWEQEKRVAVEGPVVCTTAGTGTGTGTAAAWFSSSGSVSPTPPVLTDDSVHGFAFASDLLWDPARWDRFPTSEPDQSQDSIKFVQRLVVADYNKTR PIPDYSNCSQIMVWRVDT

Full Sequence
Protein Sequence Length: 378 Download
MASPKHSHQH RASAAPPASS NSHSKHMSKQ HYARAAASST KQRPLSLRRA MLHSCVCFLV 60 GLLTGFAPSD WTDAASRAAV HANAAATAQV FRALHAMNNT AAAGALGHLL TLQHYQSSYQ 120 QPQQPPPLDL VVVVTTTTTS TGLSERERRS AGLTRTAHAL RLVSPPVVWL VVESAREAGP 180 TARLLRRTGV VYRHLTYGEN FTSEAWEEER HHQRNQALAH IEQHRLRGVV LFAGLADVYD 240 VRLLENLRHI RTVGAWPVAT VWEQEKRVAV EGPVVCTTAG TGTGTGTAAA WFSSSGSVSP 300 TPPVLTDDSV HGFAFASDLL WDPARWDRFP TSEPDQSQDS IKFVQRLVVA DYNKTRPIPD 360 YSNCSQIMVW RVDTTLL*

Full Sequence

Protein Sequence Length: 378 Download

MASPKHSHQH RASAAPPASS NSHSKHMSKQ HYARAAASST KQRPLSLRRA MLHSCVCFLV    60
GLLTGFAPSD WTDAASRAAV HANAAATAQV FRALHAMNNT AAAGALGHLL TLQHYQSSYQ    120
QPQQPPPLDL VVVVTTTTTS TGLSERERRS AGLTRTAHAL RLVSPPVVWL VVESAREAGP    180
TARLLRRTGV VYRHLTYGEN FTSEAWEEER HHQRNQALAH IEQHRLRGVV LFAGLADVYD    240
VRLLENLRHI RTVGAWPVAT VWEQEKRVAV EGPVVCTTAG TGTGTGTAAA WFSSSGSVSP    300
TPPVLTDDSV HGFAFASDLL WDPARWDRFP TSEPDQSQDS IKFVQRLVVA DYNKTRPIPD    360
YSNCSQIMVW RVDTTLL* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam03360	Glyco_transf_43	3.0e-29	157	374	225	+ Glycosyltransferase family 43.
cd00218	GlcAT-I	3.0e-43	146	374	233	+ Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
PLN02458	PLN02458	1.0e-55	153	372	222	+ transferase, transferring glycosyl groups

Gene Ontology
GO Term	Description
GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0016020	membrane

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	ACG39763.1	0	1	377	1	372	hypothetical protein [Zea mays]
RefSeq	NP_001049780.1	0	48	377	24	346	Os03g0287800 [Oryza sativa (japonica cultivar-group)]
RefSeq	NP_001060738.1	0	38	376	16	338	Os07g0694400 [Oryza sativa (japonica cultivar-group)]
RefSeq	NP_001132861.1	0	1	377	1	374	hypothetical protein LOC100194354 [Zea mays]
RefSeq	XP_002463447.1	0	1	377	1	377	hypothetical protein SORBIDRAFT_02g044020 [Sorghum bicolor]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1v84_B	0.000000006	146	374	14	233	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1v84_A	0.000000006	146	374	14	233	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1v83_B	0.000000006	146	374	14	233	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1v83_A	0.000000006	146	374	14	233	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1v82_B	0.000000006	146	374	14	233	A Chain A, Crystal Structure Of Human Glcat-P Apo Form

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

CA271063

231

274

DT942339

258

275

DV174797

247

275

DV517026

258

275

EE152464

258

275

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_007_00731.2	Aquca_007_00731.1	Aquca_001_00368.3	Aquca_001_00368.2	Aquca_001_00368.1
	Aquca_010_00019.1	Aquca_027_00094.1
Arabidopsis lyrata	912627	496876	890287	902844
Arabidopsis thaliana	AT5G67230.1	AT4G36890.1	AT1G27600.2	AT1G27600.1	AT2G37090.1
Brachypodium distachyon	Bradi1g33320.3	Bradi1g33320.2	Bradi1g33320.1	Bradi5g24290.1	Bradi3g23120.1
	Bradi2g00290.1	Bradi5g02350.1	Bradi2g46410.1	Bradi2g16840.1	Bradi1g16540.1
	Bradi1g65750.1	Bradi1g16540.2	Bradi2g37970.3	Bradi2g37970.1
Brassica rapa	Bra012145	Bra011745	Bra010929	Bra030055	Bra005218
Carica papaya	evm.model.supercontig_55.103	evm.model.supercontig_7.258	evm.model.supercontig_366.2	evm.model.supercontig_286.11
Capsella rubella	Carubv10004588m	Carubv10027753m	Carubv10009365m	Carubv10025381m	Carubv10025384m
Citrus clementina	Ciclev10025401m	Ciclev10008306m	Ciclev10008305m	Ciclev10008303m	Ciclev10001397m
	Ciclev10012036m
Citrus sinensis	orange1.1g013985m	orange1.1g010452m	orange1.1g013438m	orange1.1g013414m	orange1.1g016070m
	orange1.1g016052m	orange1.1g042066m
Cucumis sativus	Cucsa.102610.2	Cucsa.102610.1	Cucsa.312290.4	Cucsa.312610.1	Cucsa.312290.3
	Cucsa.312290.2	Cucsa.312290.1.175.269	Cucsa.312290.1.175.269	Cucsa.307090.2	Cucsa.307090.1
	Cucsa.312290.1.357.476	Cucsa.312290.1.357.476
Eucalyptus grandis	Eucgr.I00880.2	Eucgr.I00880.1	Eucgr.H02219.1	Eucgr.C00584.1	Eucgr.F00463.3
	Eucgr.F00463.2	Eucgr.F00463.1	Eucgr.F02177.3	Eucgr.F02177.2	Eucgr.F02177.1
	Eucgr.A01172.1	Eucgr.K03214.1
Fragaria vesca	mrna23860.1-v1.0-hybrid	mrna09635.1-v1.0-hybrid	mrna08813.1-v1.0-hybrid	mrna26845.1-v1.0-hybrid
Glycine max	Glyma17g18450.2	Glyma17g18450.1	Glyma16g16280.1	Glyma11g05640.1	Glyma01g39610.1
	Glyma05g20910.2	Glyma06g08820.1	Glyma04g08720.2	Glyma04g08720.1	Glyma03g33570.1
	Glyma19g36280.1	Glyma10g05730.2	Glyma10g05730.1	Glyma13g20080.1	Glyma13g20080.2
	Glyma06g09560.1	Glyma04g09470.2
Gossypium raimondii	Gorai.007G216800.2	Gorai.007G216800.1	Gorai.003G026800.1	Gorai.004G051000.1	Gorai.004G051100.1
	Gorai.004G290300.4	Gorai.004G290300.3	Gorai.004G290300.2	Gorai.004G290300.1	Gorai.009G051500.3
	Gorai.009G051500.2	Gorai.009G051500.1	Gorai.005G097300.3	Gorai.005G097300.2	Gorai.005G097300.1
	Gorai.002G137600.1	Gorai.006G168500.1	Gorai.010G031000.2	Gorai.010G031000.1	Gorai.006G168500.2
Linum usitatissimum	Lus10010268	Lus10041601	Lus10011500	Lus10019325	Lus10032817
	Lus10007692	Lus10019917	Lus10026487	Lus10015069
Malus domestica	MDP0000186002	MDP0000308871	MDP0000207693	MDP0000287243	MDP0000666177
	MDP0000703247	MDP0000259253	MDP0000487987	MDP0000131594	MDP0000126039
	MDP0000130817
Manihot esculenta	cassava4.1_006028m	cassava4.1_006067m	cassava4.1_008517m	cassava4.1_007765m	cassava4.1_008594m
	cassava4.1_031170m	cassava4.1_029083m
Medicago truncatula	Medtr5g016600.1	AC225517_17.1	Medtr3g111060.1	Medtr7g100800.1
Mimulus guttatus	mgv1a004664m	mgv1a008341m	mgv1a011740m	mgv1a020319m	mgv1a007326m
	mgv1a007301m	mgv1a010149m	mgv1a009864m
Oryza sativa	LOC_Os06g47340.1	LOC_Os04g55670.1	LOC_Os10g13810.1	LOC_Os03g17850.1	LOC_Os01g48440.1
	LOC_Os01g48440.3	LOC_Os01g48440.2	LOC_Os05g48600.2	LOC_Os05g48600.1	LOC_Os01g06450.1
	LOC_Os04g01280.1	LOC_Os05g03174.2	LOC_Os05g03174.1	LOC_Os07g49370.1
Panicum virgatum	Pavirv00070690m	Pavirv00002442m	Pavirv00049605m	Pavirv00049604m	Pavirv00066013m
	Pavirv00015553m	Pavirv00048742m	Pavirv00020159m	Pavirv00023302m	Pavirv00014028m
	Pavirv00068635m	Pavirv00020160m	Pavirv00041023m	Pavirv00041022m	Pavirv00069320m
	Pavirv00069319m	Pavirv00064679m	Pavirv00025005m	Pavirv00063696m	Pavirv00054446m
	Pavirv00038884m	Pavirv00043409m	Pavirv00036401m
Physcomitrella patens	Pp1s248_13V6.1	Pp1s78_128V6.1	Pp1s19_221V6.1	Pp1s1_540V6.1	Pp1s52_108V6.1
Phaseolus vulgaris	Phvul.002G016000.1	Phvul.009G107900.2	Phvul.009G107900.1	Phvul.001G175200.1	Phvul.007G164400.2
	Phvul.009G146400.1	Phvul.007G164400.1
Picea abies	MA_10433413g0010	MA_9135945g0010	MA_10426088g0010	MA_42440g0010
Populus trichocarpa	Potri.007G047500.2	Potri.007G047500.1	Potri.005G141500.1	Potri.002G107300.3	Potri.002G107300.2
	Potri.002G107300.1	Potri.006G240200.1	Potri.006G240200.2	Potri.006G131000.2	Potri.006G131000.1
	Potri.016G086400.1	Potri.018G039900.1
Prunus persica	ppa004411m	ppa005926m	ppa006476m	ppa007640m
Ricinus communis	29794.m003437	30170.m013621	29805.m001478
Setaria italica	Si006224m	Si010088m	Si002282m	Si036401m	Si001449m
	Si022019m	Si010329m	Si010328m	Si005128m	Si030381m
	Si022408m
Selaginella moellendorffii	12082	78265	416278
Sorghum bicolor	Sb10g027970.1	Sb06g030810.1	Sb03g011010.1	Sb09g028220.1	Sb03g030990.1
	Sb06g000430.1	Sb01g038640.1	Sb03g005410.1	Sb09g002200.1
Thellungiella halophila	Thhalv10024924m	Thhalv10004084m	Thhalv10007547m	Thhalv10016877m
Vitis vinifera	GSVIVT01022064001	GSVIVT01035647001	GSVIVT01025636001	GSVIVT01009245001

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis lyrata

912627