| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g044020.1 |
| Family | GT43 |
| Protein Properties | Length: 378 Molecular Weight: 41336.6 Isoelectric Point: 9.6047 |
| Chromosome | Chromosome/Scaffold: 2 Start: 77837940 End: 77842731 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 157 | 374 | 0 |
| AHALRLVSPPVVWLVVESAREAGPTARLLRRTGVVYRHLTYGENFTSEAWEEERHHQRNQALAHIEQHRLRGVVLFAGLADVYDVRLLENLRHIRTVGAW PVATVWEQEKRVAVEGPVVCTTAGTGTGTGTAAAWFSSSGSVSPTPPVLTDDSVHGFAFASDLLWDPARWDRFPTSEPDQSQDSIKFVQRLVVADYNKTR PIPDYSNCSQIMVWRVDT | |||
| Full Sequence |
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| Protein Sequence Length: 378 Download |
| MASPKHSHQH RASAAPPASS NSHSKHMSKQ HYARAAASST KQRPLSLRRA MLHSCVCFLV 60 GLLTGFAPSD WTDAASRAAV HANAAATAQV FRALHAMNNT AAAGALGHLL TLQHYQSSYQ 120 QPQQPPPLDL VVVVTTTTTS TGLSERERRS AGLTRTAHAL RLVSPPVVWL VVESAREAGP 180 TARLLRRTGV VYRHLTYGEN FTSEAWEEER HHQRNQALAH IEQHRLRGVV LFAGLADVYD 240 VRLLENLRHI RTVGAWPVAT VWEQEKRVAV EGPVVCTTAG TGTGTGTAAA WFSSSGSVSP 300 TPPVLTDDSV HGFAFASDLL WDPARWDRFP TSEPDQSQDS IKFVQRLVVA DYNKTRPIPD 360 YSNCSQIMVW RVDTTLL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 3.0e-29 | 157 | 374 | 225 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 3.0e-43 | 146 | 374 | 233 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 1.0e-55 | 153 | 372 | 222 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG39763.1 | 0 | 1 | 377 | 1 | 372 | hypothetical protein [Zea mays] |
| RefSeq | NP_001049780.1 | 0 | 48 | 377 | 24 | 346 | Os03g0287800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060738.1 | 0 | 38 | 376 | 16 | 338 | Os07g0694400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132861.1 | 0 | 1 | 377 | 1 | 374 | hypothetical protein LOC100194354 [Zea mays] |
| RefSeq | XP_002463447.1 | 0 | 1 | 377 | 1 | 377 | hypothetical protein SORBIDRAFT_02g044020 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000000006 | 146 | 374 | 14 | 233 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1v84_A | 0.000000006 | 146 | 374 | 14 | 233 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1v83_B | 0.000000006 | 146 | 374 | 14 | 233 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1v83_A | 0.000000006 | 146 | 374 | 14 | 233 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1v82_B | 0.000000006 | 146 | 374 | 14 | 233 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA271063 | 231 | 46 | 274 | 0 |
| DT942339 | 258 | 25 | 275 | 0 |
| DV174797 | 247 | 36 | 275 | 0 |
| DV517026 | 258 | 25 | 275 | 0 |
| EE152464 | 258 | 25 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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