| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g001450.1 |
| Family | AA1 |
| Protein Properties | Length: 588 Molecular Weight: 64375 Isoelectric Point: 7.2855 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1309944 End: 1311915 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 355 | 568 | 1.4013e-45 |
| AWDDVTARVEQSRSLAVAHRDHVQPVPPRPDRALLLLNTQNRIGGHTKWAINGVSLAFPATPYLVSMKRGLRGAYDDARPPPETYDYRSYDIGRPPAANG TVASAVYRLALGSVVDVVLQNTVALNNKSETHPWHLHGHDFWVLAYGDGKFDPETDTARFNLRDPVMKNTVALHPKGWTAVRFVADNPGVWLFHCHIEAH VYMGMGVVFEEGVD | |||
| AA1 | 79 | 370 | 0 |
| VHNKLETENTGIHWHGIRQIGSPWADGTVGVTQCPILPGDTFTYRFVVDRPGTYFYHAHYGMQRVAGLDGMLVVSSSSVPDGGVAAEPFTYDEERTVLLM DWWHKSVYEQAVGLASDPLRFVGEPQSLLINGRGVFEPFHCSRAPNGSGDAACNRPRPAGCAPPTLFTAVPRKTYRLRVGSLTSLSALNFAIEGHSMTVV EADGHYVRPVVVDSLYIYSGESYSVLVEADQDPSRNYWAASHVVARERNTTSAVAILSYASNDPRAAPPTPRPEGPAWDDVTARVEQSRSLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 588 Download |
| MAPPRRPLRM PAAVLLLLVL CALAALSVYA EAKVHHYTWD IAYHYKSLDC VEKLAVTING 60 ESPGPTIHAT QGDTVVVTVH NKLETENTGI HWHGIRQIGS PWADGTVGVT QCPILPGDTF 120 TYRFVVDRPG TYFYHAHYGM QRVAGLDGML VVSSSSVPDG GVAAEPFTYD EERTVLLMDW 180 WHKSVYEQAV GLASDPLRFV GEPQSLLING RGVFEPFHCS RAPNGSGDAA CNRPRPAGCA 240 PPTLFTAVPR KTYRLRVGSL TSLSALNFAI EGHSMTVVEA DGHYVRPVVV DSLYIYSGES 300 YSVLVEADQD PSRNYWAASH VVARERNTTS AVAILSYASN DPRAAPPTPR PEGPAWDDVT 360 ARVEQSRSLA VAHRDHVQPV PPRPDRALLL LNTQNRIGGH TKWAINGVSL AFPATPYLVS 420 MKRGLRGAYD DARPPPETYD YRSYDIGRPP AANGTVASAV YRLALGSVVD VVLQNTVALN 480 NKSETHPWHL HGHDFWVLAY GDGKFDPETD TARFNLRDPV MKNTVALHPK GWTAVRFVAD 540 NPGVWLFHCH IEAHVYMGMG VVFEEGVDKV GRLPKSIMGC GRSRTLP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 4.0e-89 | 50 | 566 | 545 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 3.0e-107 | 32 | 578 | 575 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 34 | 583 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 30 | 584 | 558 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 30 | 584 | 561 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001063614.1 | 0 | 33 | 584 | 24 | 570 | Os09g0507300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002454922.1 | 0 | 1 | 587 | 1 | 587 | hypothetical protein SORBIDRAFT_03g001450 [Sorghum bicolor] |
| RefSeq | XP_002462284.1 | 0 | 36 | 584 | 28 | 567 | hypothetical protein SORBIDRAFT_02g023140 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 36 | 584 | 27 | 568 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| RefSeq | XP_002462286.1 | 0 | 30 | 584 | 31 | 576 | hypothetical protein SORBIDRAFT_02g023160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 581 | 1 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 0 | 32 | 581 | 1 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 0 | 32 | 581 | 1 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_A | 0 | 32 | 581 | 1 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1aso_B | 0 | 32 | 581 | 1 | 539 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
