| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g002590.1 |
| Family | GT14 |
| Protein Properties | Length: 491 Molecular Weight: 53402.6 Isoelectric Point: 9.5774 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2485545 End: 2488207 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 139 | 391 | 0 |
| LAYLISGSKGDLDRLWRALHALYHPRNQYVVHLDREAPVAERLELAARVANSTVFRRTGNVHVVRRANMVTYRGPTMVANTLHACAILLRRGGAWDWFIN LSASDYPLMTQDDILHVFSTVPRNVNFIEHTGNLGWKEWQRGRPMIVDPGLYGSKKEDLFWVTPKRALPTAFKLFTGSAWVALTRDFVEYTVWGWDNLPR TLLMYYANFVSSPEGYFQTLLCNAPRFVPSVANHDLHHIQWDVPPKQHPHALA | |||
| Full Sequence |
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| Protein Sequence Length: 491 Download |
| MHGNGGRGDQ HSPRSAKSVS PRGGGEHDHH YSPSAKTPRG GGGGAGAAAS PMKLLPSSAA 60 WLVDSRWALS AALSLLLFLA VALAVTSSSS SYISSSSSFF SFLPATRAAD FVEGERARPQ 120 ATAAANDTAP PPGSGVPRLA YLISGSKGDL DRLWRALHAL YHPRNQYVVH LDREAPVAER 180 LELAARVANS TVFRRTGNVH VVRRANMVTY RGPTMVANTL HACAILLRRG GAWDWFINLS 240 ASDYPLMTQD DILHVFSTVP RNVNFIEHTG NLGWKEWQRG RPMIVDPGLY GSKKEDLFWV 300 TPKRALPTAF KLFTGSAWVA LTRDFVEYTV WGWDNLPRTL LMYYANFVSS PEGYFQTLLC 360 NAPRFVPSVA NHDLHHIQWD VPPKQHPHAL ALADMPAMLA SGAPFARKFP RDDPVLDAID 420 DGLLARPRPA NGTSTAGEVA FVPGGWCGAD ATCAAVDNDW VLRPGPGAER FGRLIDRIVR 480 SEAFPNRQCK * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 2.0e-77 | 139 | 385 | 250 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 134 | 490 | 357 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF87198.1 | 0 | 1 | 490 | 1 | 463 | unknown [Zea mays] |
| DDBJ | BAH01648.1 | 0 | 10 | 490 | 19 | 480 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001148073.1 | 0 | 1 | 485 | 1 | 458 | xylosyltransferase oxt [Zea mays] |
| RefSeq | XP_002457166.1 | 0 | 1 | 490 | 1 | 490 | hypothetical protein SORBIDRAFT_03g002590 [Sorghum bicolor] |
| RefSeq | XP_002457167.1 | 0 | 1 | 490 | 1 | 496 | hypothetical protein SORBIDRAFT_03g002600 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000000000008 | 150 | 423 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000000000008 | 150 | 423 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000000000008 | 150 | 423 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000000000008 | 150 | 423 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000000000002 | 150 | 423 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA157959 | 303 | 148 | 448 | 0 |
| EB451733 | 290 | 137 | 426 | 0 |
| JG697727 | 312 | 168 | 479 | 0 |
| DY275686 | 310 | 138 | 447 | 0 |
| DR097254 | 283 | 135 | 417 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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