| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g002600.1 |
| Family | GT14 |
| Protein Properties | Length: 497 Molecular Weight: 53871.3 Isoelectric Point: 10.0863 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2493934 End: 2497892 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 143 | 394 | 0 |
| LAYLISGSKGDLDRLWRALHALYHPRNQYVVHLDREAPVAERLELAARVANSTVFRRTGNVHVVRRANMVTYRGPTMVANTLHACAILLRRGGAWDWFIN LSASDYPLMTQDDILHTFSTVPRNINFIGHTGNLGWKMWQRGQPMIVDPGLYGSKKQDLFWVAPKRALPTAFKLFTGSAWVALTRDLVEYTVWGWDNLPR TLLMYYANFISSPEGYFQTLVCNAPRFVPTVANHDLHHIQWDVPPKQHPRAL | |||
| Full Sequence |
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| Protein Sequence Length: 497 Download |
| MHGNGGRGDQ HSPRSVKSAP PRGGGGAGGG DHDHHYSPSA KTPRGGGGAG AAASPMKLLP 60 SSAAWLVDSR WALSAALSLL LFLAVALAVT SSSSSYISSS SSFFSFLPAT RAADFVEGER 120 ARPQATAAAN DTAPPPGSGV PRLAYLISGS KGDLDRLWRA LHALYHPRNQ YVVHLDREAP 180 VAERLELAAR VANSTVFRRT GNVHVVRRAN MVTYRGPTMV ANTLHACAIL LRRGGAWDWF 240 INLSASDYPL MTQDDILHTF STVPRNINFI GHTGNLGWKM WQRGQPMIVD PGLYGSKKQD 300 LFWVAPKRAL PTAFKLFTGS AWVALTRDLV EYTVWGWDNL PRTLLMYYAN FISSPEGYFQ 360 TLVCNAPRFV PTVANHDLHH IQWDVPPKQH PRALALADMP GMLASGAPFA RKFPRDDPVL 420 DAIDDGLLAR PRLTNNIGNG TAGEVAFVPG GWCGADATCQ AVDNDWVLRP GPGAERFGRL 480 IDRIVRSKTF LNRQCK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-76 | 143 | 403 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 138 | 496 | 359 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF87198.1 | 0 | 1 | 496 | 1 | 463 | unknown [Zea mays] |
| DDBJ | BAH01648.1 | 0 | 34 | 496 | 19 | 480 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001148073.1 | 0 | 1 | 490 | 1 | 457 | xylosyltransferase oxt [Zea mays] |
| RefSeq | XP_002457166.1 | 0 | 1 | 496 | 1 | 490 | hypothetical protein SORBIDRAFT_03g002590 [Sorghum bicolor] |
| RefSeq | XP_002457167.1 | 0 | 1 | 496 | 1 | 496 | hypothetical protein SORBIDRAFT_03g002600 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000000000009 | 154 | 435 | 96 | 388 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000000000009 | 154 | 435 | 96 | 388 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000000000009 | 154 | 435 | 96 | 388 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000000000009 | 154 | 435 | 96 | 388 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000000003 | 154 | 435 | 96 | 388 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA157959 | 303 | 152 | 454 | 0 |
| EB451733 | 290 | 141 | 430 | 0 |
| DR097254 | 283 | 139 | 421 | 0 |
| DY275686 | 312 | 142 | 453 | 0 |
| JG697727 | 319 | 172 | 490 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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