| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g004380.1 |
| Family | AA2 |
| Protein Properties | Length: 332 Molecular Weight: 35272.8 Isoelectric Point: 6.5036 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4649998 End: 4651337 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 53 | 314 | 0 |
| YDRDATIAPGLLRLHFHDCFVQGCDASVLISGSSSERSAPQNFGLRGFEVIDDAKSQLEAVCPGVVSCADILALAARDAVDLTGGPSWSVPLGRRDGRLS SASGANALPSPADPVSVQRKKFADQGLTDHDLVTLVGAHTIGQTDCQFFSYRLYNFTATGNADPTISQASLAQLRALCPPPSGGDPAGRRVALDQGSPGA FDVSFFKNVRDGGAVLESDQRLWSDAATQGVVQKYAGNVRGLFGLRFGYELPKAMVRMSSIG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 332 Download |
| MAAPEMAALL LLSFTVILLR SSSVRSQGLQ IGFYDSYCPD AEDIVRSTVE QYYDRDATIA 60 PGLLRLHFHD CFVQGCDASV LISGSSSERS APQNFGLRGF EVIDDAKSQL EAVCPGVVSC 120 ADILALAARD AVDLTGGPSW SVPLGRRDGR LSSASGANAL PSPADPVSVQ RKKFADQGLT 180 DHDLVTLVGA HTIGQTDCQF FSYRLYNFTA TGNADPTISQ ASLAQLRALC PPPSGGDPAG 240 RRVALDQGSP GAFDVSFFKN VRDGGAVLES DQRLWSDAAT QGVVQKYAGN VRGLFGLRFG 300 YELPKAMVRM SSIGVKTGGQ GEIRRRCSRV N* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 0.006 | 259 | 290 | 32 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 3.0e-27 | 43 | 312 | 304 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-68 | 45 | 193 | 150 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 3.0e-149 | 14 | 331 | 319 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 3.0e-161 | 28 | 330 | 306 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU21175.1 | 0 | 16 | 331 | 10 | 321 | unknown [Glycine max] |
| DDBJ | BAD68110.1 | 0 | 1 | 331 | 1 | 326 | putative peroxidase [Oryza sativa Japonica Group] |
| GenBank | EAY72725.1 | 0 | 1 | 331 | 1 | 319 | hypothetical protein OsI_00589 [Oryza sativa Indica Group] |
| RefSeq | XP_002457263.1 | 0 | 1 | 331 | 1 | 331 | hypothetical protein SORBIDRAFT_03g004380 [Sorghum bicolor] |
| RefSeq | XP_002524497.1 | 0 | 6 | 331 | 1 | 321 | Peroxidase 25 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 29 | 331 | 3 | 304 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 1pa2_A | 0 | 29 | 331 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 4a5g_B | 0 | 29 | 331 | 4 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 0 | 29 | 331 | 4 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3hdl_A | 0 | 29 | 331 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
