| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g007930.1 |
| Family | CE13 |
| Protein Properties | Length: 441 Molecular Weight: 48096.2 Isoelectric Point: 7.7232 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8320758 End: 8324378 |
| Description | Pectinacetylesterase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE13 | 69 | 408 | 0 |
| SNLVELTLLTAAQDKGAVCLDGSPPGYHLQAGTGAGSSSWLIHLMGGGWCDTVRSCSDRSKGYLGSSLYMEKLMDFSGILSNDPAQNPDFYSWNRVFVRY CDGASFSGDSQLEAAEHGNGTLFFRGLRIWEATLLTGCSAGGLATLLHCNDFRSRFPPEVTVKCLSDAGFFVDAKDLSGQRSMRSVYNGVVHLQNVTSTK VLPKDCLLANKDPTQCFFPAELIKSLSTPTLIVNSAYDSWQVRFVVAPDGSSPDESWRSCRADVRRCNSSQIQVLNAFRKEMVDDLEAADDNTNNSWFID SCFTHCQTIFDDSGWNKQVAPRIGNKTLKEVMGDWYFGRS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MATTELRSPL LPLPPPPQRQ RRISARAAAL AVSATVVVLL LPFLIASFGG TTSTSRRHPP 60 RHRSSSSSSN LVELTLLTAA QDKGAVCLDG SPPGYHLQAG TGAGSSSWLI HLMGGGWCDT 120 VRSCSDRSKG YLGSSLYMEK LMDFSGILSN DPAQNPDFYS WNRVFVRYCD GASFSGDSQL 180 EAAEHGNGTL FFRGLRIWEA TLLTGCSAGG LATLLHCNDF RSRFPPEVTV KCLSDAGFFV 240 DAKDLSGQRS MRSVYNGVVH LQNVTSTKVL PKDCLLANKD PTQCFFPAEL IKSLSTPTLI 300 VNSAYDSWQV RFVVAPDGSS PDESWRSCRA DVRRCNSSQI QVLNAFRKEM VDDLEAADDN 360 TNNSWFIDSC FTHCQTIFDD SGWNKQVAPR IGNKTLKEVM GDWYFGRSPS PVVRQVGCEY 420 PCNPTGCQLA QQSSSARTKE * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03355 | VI_chp_2 | 0.008 | 324 | 409 | 93 | + type VI secretion protein, EvpB/VC_A0108 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PMID:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]. | ||
| pfam03283 | PAE | 4.0e-152 | 71 | 409 | 354 | + Pectinacetylesterase. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY76796.1 | 0 | 66 | 425 | 37 | 402 | hypothetical protein OsI_04753 [Oryza sativa Indica Group] |
| GenBank | EEC71941.1 | 0 | 72 | 425 | 30 | 389 | hypothetical protein OsI_04755 [Oryza sativa Indica Group] |
| RefSeq | NP_001045062.1 | 0 | 72 | 425 | 30 | 389 | Os01g0892600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151408.1 | 0 | 60 | 425 | 56 | 433 | carboxylic ester hydrolase [Zea mays] |
| RefSeq | XP_002455293.1 | 0 | 1 | 440 | 1 | 440 | hypothetical protein SORBIDRAFT_03g007930 [Sorghum bicolor] |
