y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g008350.2 |
Family | GH1 |
Protein Properties | Length: 406 Molecular Weight: 45287.3 Isoelectric Point: 9.542 |
Chromosome | Chromosome/Scaffold: 3 Start: 8839630 End: 8843134 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 54 | 370 | 0 |
RRSFPKGFVFGTAASAYQVEGMAHKDGRGPSIWDAFISIPGEIANNATADVTVDEYHRYKEDVNIMKRMGFDAYRFSISWSRIFPNGTGKVNWKGVAYYN RLINYMLKIGITPYANLYHYDLPEALEVQYGGLLNRKVVNSFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDDGRFAPGRCTKCKAGNSATEPYIVA HHLILSHAAAVQRYRQKYQLTQKGRIGILLDFVWYEALTNSTADQAAAERSRDFHVGWFLHPIIYGQYPNSVQKIVKERLPKFTADEINIVKGSIDYVGV NQYTAYYVRDQQPNATT |
Full Sequence |
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Protein Sequence Length: 406 Download |
MADASRSRAR VGGGGRRSVL ALLLLLSVGA RASGDGEAGA GEKVAAAWTG GLSRRSFPKG 60 FVFGTAASAY QVEGMAHKDG RGPSIWDAFI SIPGEIANNA TADVTVDEYH RYKEDVNIMK 120 RMGFDAYRFS ISWSRIFPNG TGKVNWKGVA YYNRLINYML KIGITPYANL YHYDLPEALE 180 VQYGGLLNRK VVNSFADYAD FCFKTFGDRV KNWMTFNEPR VVAALGYDDG RFAPGRCTKC 240 KAGNSATEPY IVAHHLILSH AAAVQRYRQK YQLTQKGRIG ILLDFVWYEA LTNSTADQAA 300 AERSRDFHVG WFLHPIIYGQ YPNSVQKIVK ERLPKFTADE INIVKGSIDY VGVNQYTAYY 360 VRDQQPNATT LLSYSSDWHA EFVYERNGVP IGPRLHCRQI QIGFT* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-104 | 52 | 364 | 318 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 7.0e-106 | 53 | 385 | 338 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 6.0e-108 | 53 | 388 | 342 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-115 | 58 | 363 | 306 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-129 | 56 | 390 | 338 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55716.1 | 0 | 50 | 402 | 21 | 374 | beta-mannosidase 3 [Oncidium Gower Ramsey] |
GenBank | ABC55717.1 | 0 | 22 | 402 | 4 | 384 | beta-mannosidase 2 [Oncidium Gower Ramsey] |
GenBank | ABC55718.1 | 0 | 50 | 402 | 21 | 374 | beta-mannosidase 1 [Oncidium Gower Ramsey] |
GenBank | EAY74244.1 | 0 | 36 | 402 | 33 | 399 | hypothetical protein OsI_02124 [Oryza sativa Indica Group] |
RefSeq | NP_001043156.1 | 0 | 36 | 402 | 33 | 399 | Os01g0508000 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3scs_B | 0 | 48 | 402 | 11 | 366 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3scs_A | 0 | 48 | 402 | 11 | 366 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3scr_B | 0 | 48 | 402 | 11 | 366 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
PDB | 3scr_A | 0 | 48 | 402 | 11 | 366 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
PDB | 3scq_B | 0 | 48 | 402 | 11 | 366 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |