| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g011010.1 |
| Family | GT43 |
| Protein Properties | Length: 341 Molecular Weight: 38455.1 Isoelectric Point: 8.7324 |
| Chromosome | Chromosome/Scaffold: 3 Start: 12159611 End: 12162239 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 94 | 317 | 0 |
| LAHTLRLVPQPLLWLVVDRGAATRETAALLRGCGLMYRHLPSSHRGDAPDDARRRGATHEHPAERGLQRRQRNAALDHIEHHRIHGLVYFADEDNVYSLD LFHQLRGIRSFGTWPVAMLGVGKSKTLLEGPVCDSSQVVGWHTNERDKRQRRFHVNTSGFAFNSSMLWDADKRAHQAWNYIRLLDTVRDGFQATTFVEQL VEDETYMEGIPTGCSKIMNVNLHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 341 Download |
| MAALPPFSPR RPFSSPCFIL CFLLGFVAGL FPFAHRHLHL DLHHLPLPVP DPPPTPPPAA 60 PTQAAPTPPP TTTTLIVVTP TRARPLQAYY LHRLAHTLRL VPQPLLWLVV DRGAATRETA 120 ALLRGCGLMY RHLPSSHRGD APDDARRRGA THEHPAERGL QRRQRNAALD HIEHHRIHGL 180 VYFADEDNVY SLDLFHQLRG IRSFGTWPVA MLGVGKSKTL LEGPVCDSSQ VVGWHTNERD 240 KRQRRFHVNT SGFAFNSSML WDADKRAHQA WNYIRLLDTV RDGFQATTFV EQLVEDETYM 300 EGIPTGCSKI MNVNLHLEDK HLVYPKGWQM TENLDVLIPL * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 2.0e-57 | 94 | 318 | 233 | + Glycosyltransferase family 43. | ||
| PLN02458 | PLN02458 | 2.0e-61 | 85 | 317 | 240 | + transferase, transferring glycosyl groups | ||
| cd00218 | GlcAT-I | 7.0e-73 | 83 | 318 | 240 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN73652.1 | 0 | 75 | 340 | 55 | 305 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19320.1 | 0 | 75 | 340 | 130 | 380 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001064310.1 | 0 | 13 | 340 | 12 | 343 | Os10g0205300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105783.1 | 0 | 1 | 340 | 1 | 330 | glycosyltransferase [Zea mays] |
| RefSeq | XP_002455452.1 | 0 | 1 | 340 | 1 | 340 | hypothetical protein SORBIDRAFT_03g011010 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 2e-24 | 74 | 311 | 4 | 227 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1v84_A | 2e-24 | 74 | 311 | 4 | 227 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1v83_B | 2e-24 | 74 | 311 | 4 | 227 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1v83_A | 2e-24 | 74 | 311 | 4 | 227 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1v82_B | 2e-24 | 74 | 311 | 4 | 227 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
