| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g013420.1 |
| Family | GH100 |
| Protein Properties | Length: 628 Molecular Weight: 70063.9 Isoelectric Point: 5.2326 |
| Chromosome | Chromosome/Scaffold: 3 Start: 16663320 End: 16666980 |
| Description | Plant neutral invertase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH100 | 140 | 600 | 0 |
| ETETEREAWRLLRRAVVSYCGEPVGTVAAEDPECTETLNYDQVFIRDFVPSALAFLMRGETEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKIRTV PLDENNEGFEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYCKITGDNALLERVDVQTGIQLILSLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI QALFYSALRCSREMLVMNNGSKNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHDATNKFNIYPEQIPSWLVDWIPEKGGYLIGNLQPAHM DFRFFSLGNLWAIASSLTTPKQAEGILSLIDEKWDDLVANMPLKICYPAMEDDEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPELARRAI AVAEERLSDDKWPEYYDTRSGRFIGKQSRSYQTWTIAGFLTSKMLLENPELASILTCDEDL | |||
| Full Sequence |
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| Protein Sequence Length: 628 Download |
| MSGQTPMGLA AAAAAAVRPC RRRLLSSASA ASASKTAAGT ATRLFPRLPH PHHPPYGRRL 60 PFLVSAASQS QASQTGPATP VPVPVASDPR AAVSGNLPFF DRVLFPDSFP LDTPPAKEED 120 DAAAVQADEA VEPPAPLREE TETEREAWRL LRRAVVSYCG EPVGTVAAED PECTETLNYD 180 QVFIRDFVPS ALAFLMRGET EIVRNFLLHT LQLQSWEKTV DCYSPGQGLM PASFKIRTVP 240 LDENNEGFEE VLDPDFGEAA IGRVAPVDSG LWWIILLRAY CKITGDNALL ERVDVQTGIQ 300 LILSLCLADG FDMFPTLLVT DGSCMIDRRM GIHGHPLEIQ ALFYSALRCS REMLVMNNGS 360 KNLIRAINNR LSALSFHIRE YYWVDMKKIN EIYRYKTEEY SHDATNKFNI YPEQIPSWLV 420 DWIPEKGGYL IGNLQPAHMD FRFFSLGNLW AIASSLTTPK QAEGILSLID EKWDDLVANM 480 PLKICYPAME DDEWRIITGS DPKNTPWSYH NGGSWPTLLW QFTLACIKMG RPELARRAIA 540 VAEERLSDDK WPEYYDTRSG RFIGKQSRSY QTWTIAGFLT SKMLLENPEL ASILTCDEDL 600 ELLEGCACCL STKRTRCSRR AAKSHIG* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06202 | GDE_C | 0.0001 | 267 | 579 | 341 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
| pfam12899 | Glyco_hydro_100 | 0 | 155 | 588 | 434 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
| PLN02703 | PLN02703 | 0 | 155 | 626 | 474 | + beta-fructofuranosidase | ||
| PLN03005 | PLN03005 | 0 | 155 | 599 | 445 | + beta-fructofuranosidase | ||
| PLN02973 | PLN02973 | 0 | 155 | 602 | 448 | + beta-fructofuranosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO25633.1 | 0 | 1 | 626 | 1 | 625 | invertase [Oryza sativa Indica Group] |
| GenBank | ACN34188.1 | 0 | 1 | 625 | 1 | 624 | unknown [Zea mays] |
| GenBank | EAY73839.1 | 0 | 7 | 626 | 1 | 619 | hypothetical protein OsI_01715 [Oryza sativa Indica Group] |
| RefSeq | NP_001042931.1 | 0 | 1 | 626 | 1 | 626 | Os01g0332100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002455584.1 | 0 | 1 | 627 | 1 | 627 | hypothetical protein SORBIDRAFT_03g013420 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO811217 | 475 | 155 | 626 | 0 |
| HO466454 | 456 | 155 | 610 | 0 |
| HO779905 | 402 | 222 | 623 | 0 |
| DV161952 | 319 | 217 | 535 | 0 |
| DV519167 | 282 | 168 | 449 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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