| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g023490.1 |
| Family | GT48 |
| Protein Properties | Length: 1796 Molecular Weight: 207690 Isoelectric Point: 8.0256 |
| Chromosome | Chromosome/Scaffold: 3 Start: 46852172 End: 46878129 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 945 | 1650 | 0 |
| GVLTPYFKEEVLFSPEDLRKKNEDGISILFYLRKIYPDEFRNFLERIDFKPKDEEELKDRMDEICPWASYRGQTLTRTVRGMMYYRKALEIQCLQDTKDP AKFDQDGLIESYRELQSSIEMAQAIADIKFTYVVSCQVYGMQKTSKDSKDKSRYQNILNLMIINPSLRVAFIDEVEAPTGNGATEKTYYSVLVKGGEKYD EEIYRIKLPGKPTDIGEGKPENQNHAIIFTRGEALQAIDMNQDNYIEEAFKMRNVLEEFESRKYGKSEPTILGLREHIFTGSVSSLAWFMSNQETSFVTI GQRVLANPLKVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSGFNSTMRGGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDIYRL GRRFDFYRMLSFYFTTVGFYFSSMVTVLTVYVFLYGRLYLVMSGLERSIMLDARNQQNVKALENALASQSIFQLGLLLVLPMVMEVGLEKGFRTALGEFV IMQLQLASVFFTFQLGTKTHYYGRTILHGGAKYRPTGRGFVVYHAKFAENYRMYSRSHFVKGLELLILLVVYLVYGRSYRSSSLYLFVTCSMWFLVASWL FAPFIFNPSCFEWQKTVDDWTDWRKWMGNRGGIGMSVEQSWEAWWLSEQDHLRKTSIRALLLEIILSLRFLIYQYGIVYHLNIADHHKSIMVYGVSWVVM LLVLVV | |||
| Full Sequence |
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| Protein Sequence Length: 1796 Download |
| MASGGAGPSG PVRSTSQTRQ RTMGRIPTRA YTMRPDGLSG EDGPGFEEEE LVPSSLAPIV 60 PILRAANEIE EENPRVAYLC RFTAFEKAHL MDPISGGRGV RQFKTYLLHR LEKDEHETNR 120 RLATTDAKEI QRFYEQYCKK YLEEGHDKRK PEEMARHYQI ASVLYDVLKT VTPGKNEYDK 180 YAKGVEKEKA SFSQYNILPL NISTPRQPIM EIPEIKAAVA LLRQMDDLPM PRIELTQSSD 240 GKTVPDEMDK PLVQDLLDWL WQTFGFQKGN VENQKEHLIL LLANIDMRQQ GTSHHSGRHV 300 HVIHSSTVIY LMDKIFQNYN SWCRYLHLDS NIIIASDAST QRPELLYIGL YLLIWGEASN 360 VRFMPECLCY IFHHMARDLH DIISDRREGP FEPPFQREGS DDAFLQLVIQ PIYSVMQKLT 420 LTHFNSFFIL ASIFLSTGQK SFDRMWAFFI LAFQAMVIIA WSSSGALSSI FEPEVFRNVL 480 TIFITAAFLN FLQATLEIIL NWKAWKSLEC SQRIRYILKF AVAVAWLIIL PTTYSSSIQN 540 PTGLVKFVSN WINLQNESIY NYAVALYMLP NIFSALFFMF LPIRRVLERS NSRIIRFLLW 600 WTQPKLYVAR GMYEDTCSLL KYTTFWILLL ICKLAFSYYV EIAPLVEPTR IIMSLERPPY 660 EWHEFFPNLR HNLGVVVTVW APIVMVYFMD TQIWYAIFST ICGGVYGAFS RLGEIRTLGM 720 LRSRFEAIPR AFGKKLVPNH GSRLKRDEED KNPPFDKFAD IWNAFINSLR EEDLLSNREK 780 NLLVVPSSGG ETSVFQWPPF LLASKIPIAL DMAKSVKKKD EELMKRIKQD PYTEYAVIEC 840 YETLLDILYS IIVEQSDKNW YCISRCYRVV DRICESIKDS IHRRSLVKEF RLDELPQLSV 900 KFDKLLDLLK KYDENDPVNN NTQIANLLQD IMEIITQDIM KNGQGVLTPY FKEEVLFSPE 960 DLRKKNEDGI SILFYLRKIY PDEFRNFLER IDFKPKDEEE LKDRMDEICP WASYRGQTLT 1020 RTVRGMMYYR KALEIQCLQD TKDPAKFDQD GLIESYRELQ SSIEMAQAIA DIKFTYVVSC 1080 QVYGMQKTSK DSKDKSRYQN ILNLMIINPS LRVAFIDEVE APTGNGATEK TYYSVLVKGG 1140 EKYDEEIYRI KLPGKPTDIG EGKPENQNHA IIFTRGEALQ AIDMNQDNYI EEAFKMRNVL 1200 EEFESRKYGK SEPTILGLRE HIFTGSVSSL AWFMSNQETS FVTIGQRVLA NPLKVRFHYG 1260 HPDIFDRLFH ITRGGISKAS KTINLSEDIF SGFNSTMRGG NVTHHEYMQV GKGRDVGMNQ 1320 ISSFEAKVAN GNGEQTLSRD IYRLGRRFDF YRMLSFYFTT VGFYFSSMVT VLTVYVFLYG 1380 RLYLVMSGLE RSIMLDARNQ QNVKALENAL ASQSIFQLGL LLVLPMVMEV GLEKGFRTAL 1440 GEFVIMQLQL ASVFFTFQLG TKTHYYGRTI LHGGAKYRPT GRGFVVYHAK FAENYRMYSR 1500 SHFVKGLELL ILLVVYLVYG RSYRSSSLYL FVTCSMWFLV ASWLFAPFIF NPSCFEWQKT 1560 VDDWTDWRKW MGNRGGIGMS VEQSWEAWWL SEQDHLRKTS IRALLLEIIL SLRFLIYQYG 1620 IVYHLNIADH HKSIMVYGVS WVVMLLVLVV LKMVSIGRQK FGTDLQLMFR ILKGLLFLGF 1680 VSVMAVLFVV LHLTISDVFA SILGYLPTGW CLLLIGQACS PLIRRTMLWD SIMELGRSYE 1740 NIMGLILFLP IGFLSWFPFV SEFQTRLLFN QAFSRGLQIS RILAGQKGIG EFEFE* 1800 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 1.0e-5 | 57 | 183 | 134 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 4.0e-19 | 358 | 418 | 61 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 946 | 1589 | 708 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002457960.1 | 0 | 1 | 1795 | 1 | 1795 | hypothetical protein SORBIDRAFT_03g023490 [Sorghum bicolor] |
| RefSeq | XP_002457964.1 | 0 | 35 | 1583 | 31 | 1518 | hypothetical protein SORBIDRAFT_03g023520 [Sorghum bicolor] |
| RefSeq | XP_002457964.1 | 0.000000003 | 1709 | 1790 | 1635 | 1716 | hypothetical protein SORBIDRAFT_03g023520 [Sorghum bicolor] |
| RefSeq | XP_002512182.1 | 0 | 14 | 416 | 7 | 390 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002512182.1 | 0 | 440 | 1787 | 475 | 1875 | conserved hypothetical protein [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
