Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g023500.1 |
Family | GH35 |
Protein Properties | Length: 831 Molecular Weight: 91239.1 Isoelectric Point: 7.8727 |
Chromosome | Chromosome/Scaffold: 3 Start: 46885345 End: 46889539 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 341 | 0 |
VIDGQRRIILSGSIHYPRSTPQMWPDLINKAKEGGLNTIETYVFWNGHEPRRRQYNFEGNYDIVRFFKEIQNAGMHAILRIGPYICGEWNYGGLPAWLRD IPGMQFRLHNDPFEREMETFTTLIVNKMKDANMFAGQGGPIILAQIENEYGNIMGKLENNQSASQYIHWCADMANKQKIGVPWIMCQQDNDVPHNVINTC NGFYCYDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSVHNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNIRQPKYGH LKDLHN |
Full Sequence |
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Protein Sequence Length: 831 Download |
MAAAPVALPL LLLAALAAAA AVASATTVAY NDRAVVIDGQ RRIILSGSIH YPRSTPQMWP 60 DLINKAKEGG LNTIETYVFW NGHEPRRRQY NFEGNYDIVR FFKEIQNAGM HAILRIGPYI 120 CGEWNYGGLP AWLRDIPGMQ FRLHNDPFER EMETFTTLIV NKMKDANMFA GQGGPIILAQ 180 IENEYGNIMG KLENNQSASQ YIHWCADMAN KQKIGVPWIM CQQDNDVPHN VINTCNGFYC 240 YDWFPNRTGI PKIWTENWTG WFKAWDKPDF HRSAEDIAFA VAMFFQKRGS VHNYYMYHGG 300 TNFGRTSGGP YITTSYDYDA PLDEYGNIRQ PKYGHLKDLH NLLKSMEKIL VHGEYKDTSH 360 GKNVTVTKYT YGGSSVCFIS NQFDDRDVNV TLAGTHLVPA WSVSILPDCK TVAYNTAKIK 420 TQTSVMVKKA NSVEKEPEAL RWSWMPENLK PFMTDDHGSF RQSRLLEQIA TSTDQSDYLW 480 YRTSLEHKGE GSYTLYVNTT GHKIYAFVNG KLVGQNQSSN GAFVFQLQSP VKLHSGKNYV 540 SLLSGTVGLK NYGPLFELVP AGIAGGPVKL VGANDTAIDL THSSWSYKSG LAGEHRQIHL 600 DKPGYKWRSH NGSGSIPVNR PFTWYKTTFA APAGDEAVVV DLLGLNKGAA WVNGNSLGRY 660 WPSYTAAEMG GCHGACDYRG KFKAEGDGIR CLTGCGEPSQ RFYHVPRSFL RAGEPNTLVL 720 FEEAGGDPAR AAFHTVAVGH VCVAAAEVGD DVTLSCGGGL GGGVVASVDV ASFGVTRGGC 780 GDYQGGCESK AALKAFRDAC VGRESCTVKY TPAFAGPGCQ SGKLTVQATC * 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 5.0e-5 | 780 | 830 | 56 | + Galactose binding lectin domain. | ||
pfam02449 | Glyco_hydro_42 | 5.0e-5 | 50 | 186 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 7.0e-21 | 36 | 333 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-159 | 36 | 343 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 30 | 830 | 831 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABU49386.1 | 0 | 26 | 830 | 29 | 828 | beta-galactosidase 15 [Oryza sativa Indica Group] |
GenBank | ACN27651.1 | 0 | 6 | 830 | 2 | 821 | unknown [Zea mays] |
GenBank | EEC66744.1 | 0 | 26 | 830 | 25 | 824 | hypothetical protein OsI_33101 [Oryza sativa Indica Group] |
RefSeq | NP_001043252.1 | 0 | 26 | 830 | 29 | 827 | Os01g0533400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002457961.1 | 0 | 31 | 830 | 31 | 830 | hypothetical protein SORBIDRAFT_03g023500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 6.02558e-44 | 24 | 339 | 4 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.99983e-42 | 28 | 349 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.99983e-42 | 28 | 349 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |