| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g028920.1 |
| Family | AA1 |
| Protein Properties | Length: 492 Molecular Weight: 53415.2 Isoelectric Point: 9.5376 |
| Chromosome | Chromosome/Scaffold: 3 Start: 57076631 End: 57078499 |
| Description | laccase 11 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 298 | 475 | 5.2e-39 |
| PSSPPRAVDRHLLYTIGLNIDPCRARSCLNGSRLAASLNNITFVMPAVALLQASSPPTSPTARPPARFNYTGVPLTTGLATSLGTRLSKVAYNLLSVESH PFHLHGYNFFVVGRGLGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLEGLKIAFLVEDGN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 492 Download |
| MAMASSRHGL PLVLSALLLA VLTLSAQADV KRYQFDIVMS NVSRLCHAKS MVTVNVGYPG 60 PTIYAREGDR VVVRARHQPR GAHNVTIHCH GLKQRRNGWA DGPANRGTLW WHAHIAWLRA 120 TVHGAVVVLP ERGVPYPFPK PDAEAEIILG EWWHADVEAI EKQGRMPGMA PNTSDAHTIN 180 GKPGPLFPCS EKHTYALQVQ WGKTYLLRVV NAAVNDELFF SIAGHTMTVV EIDATYTKPL 240 AASTIQLSPG QTTNVLVRAD QKPGRYFMAA KPFNHVPVPA DDKTRPPPSS STPASRPPSS 300 PPRAVDRHLL YTIGLNIDPC RARSCLNGSR LAASLNNITF VMPAVALLQA SSPPTSPTAR 360 PPARFNYTGV PLTTGLATSL GTRLSKVAYN LLSVESHPFH LHGYNFFVVG RGLGNFDPAK 420 DPAKYNLVDP PERNTVGVPA GGWTAIRFRA DNPGVWFLHC HLEGLKIAFL VEDGNGPDES 480 VLPPPKDLPE C* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 6.0e-29 | 395 | 463 | 69 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03388 | ascorbase | 3.0e-29 | 30 | 265 | 282 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-31 | 392 | 475 | 89 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| pfam00394 | Cu-oxidase | 2.0e-40 | 147 | 274 | 132 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| TIGR03389 | laccase | 0 | 30 | 491 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ12812.1 | 0 | 29 | 491 | 27 | 562 | hypothetical protein OsJ_02731 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q8RYM9 | 0 | 29 | 491 | 27 | 562 | LAC2_ORYSJ RecName: Full=Laccase-2; AltName: Full=Benzenediol:oxygen oxidoreductase 2; AltName: Full=Urishiol oxidase 2; AltName: Full=Diphenol oxidase 2; Flags: Precursor |
| RefSeq | XP_002458206.1 | 0 | 1 | 491 | 1 | 491 | hypothetical protein SORBIDRAFT_03g028920 [Sorghum bicolor] |
| RefSeq | XP_002512915.1 | 0 | 1 | 491 | 1 | 558 | laccase, putative [Ricinus communis] |
| RefSeq | XP_002519529.1 | 0 | 11 | 491 | 8 | 559 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 469 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asq_A | 0 | 28 | 469 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_B | 0 | 28 | 469 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_A | 0 | 28 | 469 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1aso_B | 0 | 28 | 469 | 1 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
