| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g029560.1 |
| Family | GH1 |
| Protein Properties | Length: 264 Molecular Weight: 29949.2 Isoelectric Point: 6.9512 |
| Chromosome | Chromosome/Scaffold: 3 Start: 57786576 End: 57792609 |
| Description | beta glucosidase 43 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 31 | 172 | 1.4e-38 |
| FSNADVVVDHYCRYKYLLQKEFGDRVKHWITFNEPHNFAIDGYDLGIEAPGCLIYSVGRENRQLNLAHNILLAHAGAFHTYKQHFKKEQGGLIGIALDSK WYEPLSDVDEDTEAGARAMDFELGWFLDPLMFGHYPPSMQKH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 264 Download |
| MGVLTLVLVS FAACAEALKR ADFPQGRVID FSNADVVVDH YCRYKYLLQK EFGDRVKHWI 60 TFNEPHNFAI DGYDLGIEAP GCLIYSVGRE NRQLNLAHNI LLAHAGAFHT YKQHFKKEQG 120 GLIGIALDSK WYEPLSDVDE DTEAGARAMD FELGWFLDPL MFGHYPPSMQ KHAVSGWLHT 180 VPWGMFKLMK QIKEKYGNPP VIITENGRKA ATSMATSYDH CSITGRGVEL VHGREVWTYY 240 VDYNNNLTRI PKASVEWFKQ VQC* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 1.0e-18 | 22 | 171 | 161 | + beta-glucosidase | ||
| TIGR03356 | BGL | 4.0e-26 | 37 | 258 | 312 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 5.0e-31 | 37 | 261 | 322 | + Glycosyl hydrolase family 1. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001146333.1 | 0 | 37 | 171 | 68 | 209 | hypothetical protein LOC100279909 [Zea mays] |
| RefSeq | NP_001146333.1 | 9e-24 | 173 | 261 | 279 | 402 | hypothetical protein LOC100279909 [Zea mays] |
| RefSeq | XP_002437464.1 | 0 | 37 | 173 | 159 | 302 | hypothetical protein SORBIDRAFT_10g027600 [Sorghum bicolor] |
| RefSeq | XP_002437464.1 | 5e-24 | 173 | 261 | 370 | 493 | hypothetical protein SORBIDRAFT_10g027600 [Sorghum bicolor] |
| RefSeq | XP_002458235.1 | 0 | 1 | 263 | 1 | 263 | hypothetical protein SORBIDRAFT_03g029560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 2e-35 | 37 | 170 | 151 | 291 | A Chain A, Pnb Esterase |
| PDB | 3gnr_A | 0.0000000006 | 173 | 261 | 362 | 485 | A Chain A, Pnb Esterase |
| PDB | 3gnp_A | 2e-35 | 37 | 170 | 151 | 291 | A Chain A, Pnb Esterase |
| PDB | 3gnp_A | 0.0000000006 | 173 | 261 | 362 | 485 | A Chain A, Pnb Esterase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
