CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb03g029770.1
FamilyGT4
Protein PropertiesLength: 501 Molecular Weight: 54945.1 Isoelectric Point: 8.2929
ChromosomeChromosome/Scaffold: 3 Start: 57961827 End: 57963583
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43154561e-25
  LVLGVSGRLVKDKGHPLLYEAFSKLVLRHPNVYLLIAGKGPWENRYMDLGRNAKVLGAVPPGKLKAFYNALDVFVDPTLRPQGLDLTLMEAMQCGKPVVA
  TRFPSIKGSIVVDDEFGYMFAPNVESLLESLEAVVAEGARRA
Full Sequence
Protein Sequence     Length: 501     Download
MALLTSPSRP RKQRCPFPAM LSLSPSLLSL ILLLPFLSLL LLNRSSFPGS SCSPALAGAA    60
SRRGSAAGFQ GDLRDIEFSW NHLPFSASRP PPAKLKIAVF SRKWPVASAP GGMERHAHTL    120
HTALAARGHR VHVFTSPPPH TEAAPSAPAD GPQLHFLDGE PGQWRCDEAW KLYEAEGEND    180
PFDVIHSESV AVFHRWALGV DKLVVSWHGI SLEALHSGIF QDLARGEEEA RSPALNQSLG    240
QSVYRVLSEV RFFRSYAHQV AISDSTGEML RDVYQIPSRR VHVILNGVDE AQFEPDTPLG    300
RAFREEVGVP KGADLVLGVS GRLVKDKGHP LLYEAFSKLV LRHPNVYLLI AGKGPWENRY    360
MDLGRNAKVL GAVPPGKLKA FYNALDVFVD PTLRPQGLDL TLMEAMQCGK PVVATRFPSI    420
KGSIVVDDEF GYMFAPNVES LLESLEAVVA EGARRAARRG RACREYAKSM FAATKMALAY    480
ERLFLCVKND TFCGYPAEFD * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR00032argG7.0e-32127483374+
cd03807GT1_WbnK_like7.0e-34245484250+
cd03811GT1_WabH_like1.0e-35111443347+
cd03798GT1_wlbH_like5.0e-41111445357+
cd03801GT1_YqgM_like1.0e-5396484405+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEAZ12928.10205001485hypothetical protein OsJ_02849 [Oryza sativa Japonica Group]
RefSeqNP_001043742.1015001503Os01g0653200 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002303479.1014951488predicted protein [Populus trichocarpa]
RefSeqXP_002326600.102649523487predicted protein [Populus trichocarpa]
RefSeqXP_002456068.1015001500hypothetical protein SORBIDRAFT_03g029770 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gek_A0.000000000411047634377A Chain A, Pnb Esterase
PDB2gej_A0.000000000411047634377A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3okp_A0.000000002286414170308A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3okc_A0.000000002286414170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB3oka_B0.000000002286414170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
Transmembrane Domains
StartEnd
2042
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GR3494822342124450
HX1845662162865010
AM7324152661804450
CA2650842282434700
GR1862222571894450
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny