| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g030340.1 |
| Family | GH5 |
| Protein Properties | Length: 433 Molecular Weight: 46294.1 Isoelectric Point: 9.8143 |
| Chromosome | Chromosome/Scaffold: 3 Start: 58592231 End: 58595663 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 44 | 372 | 8.6e-33 |
| NGKPFFANGFNAYWLMTLGADPAQRGKVTSALSQAAGAGLSVARTWAFNDGGGSSGALQYSPGRYNENTFQGLDFVLAEARKYGIKMILSLVNNYDSFGG RKQYVQWAREQGQAIGSDDEFFTNPVAKGLYKNHIKAVLTRVNTITGVAYKDDPTIMAWELMNEPRCQSDVSGHTIQSWITEMAAHVKSIDGNHLLEAGL EGFYGASSPPSRRSSVNPSGYQVGTDFIANNQAPGVDFATVHSYPDQWLPGLDAPSQLRFLGAWLDAHIADAQAVLRKPLLVAEFGKSRRDPGYSGDGQR DAVFAAVYAKVYNSARAGGPAAGALFWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MGLRGRGALA LLLVLFVHGG GQQAAEAAGG DAFVRVQGTR FVHNGKPFFA NGFNAYWLMT 60 LGADPAQRGK VTSALSQAAG AGLSVARTWA FNDGGGSSGA LQYSPGRYNE NTFQGLDFVL 120 AEARKYGIKM ILSLVNNYDS FGGRKQYVQW AREQGQAIGS DDEFFTNPVA KGLYKNHIKA 180 VLTRVNTITG VAYKDDPTIM AWELMNEPRC QSDVSGHTIQ SWITEMAAHV KSIDGNHLLE 240 AGLEGFYGAS SPPSRRSSVN PSGYQVGTDF IANNQAPGVD FATVHSYPDQ WLPGLDAPSQ 300 LRFLGAWLDA HIADAQAVLR KPLLVAEFGK SRRDPGYSGD GQRDAVFAAV YAKVYNSARA 360 GGPAAGALFW QLLTEGMDSY GDGYEVVLRQ APSTTGVITT QSRRLQGLVR AFVRARKVQR 420 GKTGKGAKGG GN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3934 | COG3934 | 4.0e-23 | 107 | 384 | 278 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF69949.1 | 0 | 22 | 428 | 15 | 413 | (1-4)-beta-mannan endohydrolase (mannan endo-1,4-beta-mannosidase), putative [Musa acuminata] |
| GenBank | EEC71222.1 | 0 | 33 | 431 | 37 | 431 | hypothetical protein OsI_03157 [Oryza sativa Indica Group] |
| RefSeq | NP_001145882.1 | 0 | 16 | 420 | 15 | 414 | hypothetical protein LOC100279398 [Zea mays] |
| Swiss-Prot | Q0JKM9 | 0 | 33 | 431 | 37 | 431 | MAN1_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 1; AltName: Full=Beta-mannanase 1; AltName: Full=Endo-beta-1,4-mannanase 1; AltName: Full=OsMAN1; Flags: Precursor |
| RefSeq | XP_002456093.1 | 0 | 1 | 432 | 1 | 432 | hypothetical protein SORBIDRAFT_03g030340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 30 | 408 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 44 | 384 | 23 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 44 | 384 | 23 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 44 | 384 | 23 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 44 | 384 | 23 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
