| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g033400.1 |
| Family | GT8 |
| Protein Properties | Length: 474 Molecular Weight: 52981.7 Isoelectric Point: 6.2297 |
| Chromosome | Chromosome/Scaffold: 3 Start: 61728916 End: 61731274 |
| Description | galacturonosyltransferase 15 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 120 | 443 | 0 |
| CLTLRLAEEFAVNSAARSPVPPPEHAPRLTDASCLHVALVTDNVLAAAVAVASAVRSADDPARLVFHVVTDKKSYVPMHSWFALHPVSPAVVEVKGLHQF DWRDAGVVASIMRTVEEVQRSSLDYHQCDGFGSAEREHRRLEASRPSTFSLLNYLKIHLPEFFPELGRVMLLDDDVVVRKDLAGLWEQDLDGNIIGAVGA HEGSGVCVDKTFGDHLNFSDPDVSGLHSSQCAWSWGVNIVDLDAWRRTNVTETYQFWLQKNRESGFRLWQMASLPPALIAVDGRVQAIEPQWNLPGLGWR VPHPDLVRSSAVLHFSGPRKPWLE | |||
| Full Sequence |
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| Protein Sequence Length: 474 Download |
| MICLYCPCTA WYTDGILTCT VPEPTPWNGQ EFMKEWRRHR EEATLLDPVV VEAAPDSLDA 60 LMAEMATMLA SYDRRIDMEA VAIKMMAMLL KMDRKVKSSR IRALFNRHLA SLGVPKSVHC 120 LTLRLAEEFA VNSAARSPVP PPEHAPRLTD ASCLHVALVT DNVLAAAVAV ASAVRSADDP 180 ARLVFHVVTD KKSYVPMHSW FALHPVSPAV VEVKGLHQFD WRDAGVVASI MRTVEEVQRS 240 SLDYHQCDGF GSAEREHRRL EASRPSTFSL LNYLKIHLPE FFPELGRVML LDDDVVVRKD 300 LAGLWEQDLD GNIIGAVGAH EGSGVCVDKT FGDHLNFSDP DVSGLHSSQC AWSWGVNIVD 360 LDAWRRTNVT ETYQFWLQKN RESGFRLWQM ASLPPALIAV DGRVQAIEPQ WNLPGLGWRV 420 PHPDLVRSSA VLHFSGPRKP WLEVAFPELR QLWLAHLNAS DSFLQGCGVV EWQ* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02742 | PLN02742 | 3.0e-63 | 41 | 467 | 433 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 2.0e-75 | 183 | 458 | 277 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02659 | PLN02659 | 4.0e-100 | 55 | 469 | 428 | + Probable galacturonosyltransferase | ||
| PLN02870 | PLN02870 | 4.0e-106 | 55 | 471 | 427 | + Probable galacturonosyltransferase | ||
| PLN02867 | PLN02867 | 3.0e-126 | 52 | 467 | 425 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34134.1 | 0 | 33 | 473 | 1 | 438 | unknown [Zea mays] |
| GenBank | EEC71413.1 | 0 | 30 | 471 | 76 | 518 | hypothetical protein OsI_03591 [Oryza sativa Indica Group] |
| RefSeq | NP_001044121.1 | 0 | 30 | 471 | 94 | 536 | Os01g0727100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147797.1 | 0 | 30 | 473 | 92 | 532 | transferase, transferring glycosyl groups [Zea mays] |
| RefSeq | XP_002456278.1 | 0 | 1 | 473 | 1 | 473 | hypothetical protein SORBIDRAFT_03g033400 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0000005 | 269 | 441 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.000004 | 269 | 441 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.000004 | 269 | 441 | 80 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL897009 | 232 | 183 | 414 | 0 |
| CB656533 | 250 | 35 | 284 | 0 |
| FL902042 | 215 | 183 | 397 | 0 |
| CD209035 | 189 | 1 | 189 | 0 |
| DN208918 | 150 | 328 | 474 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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