| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g034385.1 |
| Family | GT66 |
| Protein Properties | Length: 706 Molecular Weight: 78418.1 Isoelectric Point: 9.1759 |
| Chromosome | Chromosome/Scaffold: 3 Start: 62592865 End: 62599011 |
| Description | staurosporin and temperature sensitive 3-like A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT66 | 2 | 636 | 0 |
| LSKNGIYEFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVETVCVFTAPIFSVNASWATYLLTKETKDPGAGLMAATILAMVPSYIS RSVAGSYDNEAVAIFALIFTFYLYVKTLNTGSLFYATLNALSYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYIAYAPLIVLGTLLAALVPVVGF NAVMTSEHFASFLVFIILHVVALGYYIKGLLTPRLFKVAMTFVITVGLAVCFAVAAILVALIASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPT WPSYFMDINVLAFLVPAGIISCFLPLSDASSFLVLYLVTSVYFSGVMVRLMLVLAPAACILSGIALSEAFGVLTRSMKFQRPTLDDGSSTAGDGSSDTPT NSEMVSKEKPSKKNRKKDRDSEGSSPVDHRTEEKLLVLPCGPSAVGIMLLIILSGFYVVHCVWAAAEAYSAPSIVLTSRSHDGFHVFDDFREAYGWLRHN TDVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMASPEKAAWEIFNSLDVKYVLVIFGGLIGYPSDDINKFLWMVRIGGGVFPQIKEADY LKDGNYRVDAHGTPTMLNSLMYKLCYYRFVETDGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 706 Download |
| FLSKNGIYEF WNWFDDRTWY PLGRVIGGTV YPGLTLTAGT IWWLLNSLNI PLSVETVCVF 60 TAPIFSVNAS WATYLLTKET KDPGAGLMAA TILAMVPSYI SRSVAGSYDN EAVAIFALIF 120 TFYLYVKTLN TGSLFYATLN ALSYFYMVCS WGGYTFIINL IPMHVLLCIV TGRYSSRLYI 180 AYAPLIVLGT LLAALVPVVG FNAVMTSEHF ASFLVFIILH VVALGYYIKG LLTPRLFKVA 240 MTFVITVGLA VCFAVAAILV ALIASSPTKG WSGRSLSLLD PTYASKYIPI IASVSEHQPP 300 TWPSYFMDIN VLAFLVPAGI ISCFLPLSDA SSFLVLYLVT SVYFSGVMVR LMLVLAPAAC 360 ILSGIALSEA FGVLTRSMKF QRPTLDDGSS TAGDGSSDTP TNSEMVSKEK PSKKNRKKDR 420 DSEGSSPVDH RTEEKLLVLP CGPSAVGIML LIILSGFYVV HCVWAAAEAY SAPSIVLTSR 480 SHDGFHVFDD FREAYGWLRH NTDVDDKVAS WWDYGYQTTA MANRTVIVDN NTWNNTHIAT 540 VGTAMASPEK AAWEIFNSLD VKYVLVIFGG LIGYPSDDIN KFLWMVRIGG GVFPQIKEAD 600 YLKDGNYRVD AHGTPTMLNS LMYKLCYYRF VETDGKGYDR VRRYEIGKKH FKLTHFEEVF 660 TTHHWMVRIY KLKPQKNRVR GKLKFKSSSK TSSMRKTGGK KSPWQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1287 | COG1287 | 3.0e-15 | 492 | 680 | 212 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 8.0e-34 | 457 | 632 | 185 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| COG1287 | COG1287 | 6.0e-39 | 8 | 371 | 376 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 1.0e-68 | 1 | 371 | 389 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79544.1 | 0 | 1 | 705 | 397 | 1119 | hypothetical protein OsI_20658 [Oryza sativa Indica Group] |
| RefSeq | NP_001056068.1 | 0 | 1 | 705 | 65 | 787 | Os05g0519900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146306.1 | 0 | 1 | 705 | 66 | 718 | hypothetical protein LOC100279881 [Zea mays] |
| RefSeq | XP_002441399.1 | 0 | 1 | 705 | 66 | 782 | hypothetical protein SORBIDRAFT_09g025920 [Sorghum bicolor] |
| RefSeq | XP_002456347.1 | 0 | 1 | 705 | 1 | 705 | hypothetical protein SORBIDRAFT_03g034385 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 461 | 696 | 20 | 266 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.0001 | 490 | 590 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.0001 | 490 | 590 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.0001 | 490 | 590 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
