| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g035410.1 |
| Family | CBM43 |
| Protein Properties | Length: 189 Molecular Weight: 18752.9 Isoelectric Point: 6.2039 |
| Chromosome | Chromosome/Scaffold: 3 Start: 63524966 End: 63525945 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 22 | 106 | 1.7e-32 |
| WCVCRPDVADAALQKTLDYACGHGADCAAVLPTGPCYSPTSVRAHCSYAANSYFQRNSGQANGATCDFGGTANLTDTDPSSGTCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 189 Download |
| MELLVFVLLL LAVPLRGSDG AWCVCRPDVA DAALQKTLDY ACGHGADCAA VLPTGPCYSP 60 TSVRAHCSYA ANSYFQRNSG QANGATCDFG GTANLTDTDP SSGTCKYPAT PSEAGTSGNA 120 TGTGTSSPGS ASNPATTPST GGSFTTPVGA FGPTPSTVSA GTTTTAAFFG RHALLVAVVS 180 VALCFLVR* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-19 | 22 | 93 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-34 | 22 | 107 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71533.1 | 0 | 13 | 113 | 15 | 114 | hypothetical protein OsI_03847 [Oryza sativa Indica Group] |
| RefSeq | NP_001044338.1 | 0 | 13 | 183 | 15 | 201 | Os01g0763900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151015.1 | 0 | 1 | 188 | 1 | 188 | glucan endo-1,3-beta-glucosidase 1 [Zea mays] |
| RefSeq | NP_001152290.1 | 3e-38 | 18 | 185 | 21 | 170 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002458540.1 | 0 | 1 | 188 | 1 | 188 | hypothetical protein SORBIDRAFT_03g035410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-21 | 14 | 109 | 5 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
