| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g035990.1 |
| Family | GT14 |
| Protein Properties | Length: 412 Molecular Weight: 44488.1 Isoelectric Point: 5.9604 |
| Chromosome | Chromosome/Scaffold: 3 Start: 63996365 End: 63997872 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 75 | 307 | 0 |
| LAYYITGGHGDCLRVTRLLKAVYHPRNRYLLHLDAGAGAYERARLASYVRSEQVFLEYGNVHVVGKGDALDGRGPSAVAAVLRGAAVLLRIGAEWDWLVT LDAADYPLVTQDDLLYALSSVPRDLNFIDHRADSGNHHVVILDQNLLQSTNAEISFSSGHREKPDAFELFRGSPWPILSRAFTEHCVAAPDNLPRTLLMY FSNTLEAREFYFQTVMANSPRFRNSTVNHSFRV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 412 Download |
| MGWVTTCSPW SAFATLAAVM TSVLVLSYVS SSFIGHQQAA YEYDDPYSPD AEPSSAATAA 60 APTPPRRGPG YPPVLAYYIT GGHGDCLRVT RLLKAVYHPR NRYLLHLDAG AGAYERARLA 120 SYVRSEQVFL EYGNVHVVGK GDALDGRGPS AVAAVLRGAA VLLRIGAEWD WLVTLDAADY 180 PLVTQDDLLY ALSSVPRDLN FIDHRADSGN HHVVILDQNL LQSTNAEISF SSGHREKPDA 240 FELFRGSPWP ILSRAFTEHC VAAPDNLPRT LLMYFSNTLE AREFYFQTVM ANSPRFRNST 300 VNHSFRVDVP PPQEKARYDA LVSSGAAFAG RFGDDEALLQ RIDEELLRRP LDGITPGEWC 360 GAVGSGVDGA AGECSVGGDI DAVRQGAAGR KLASLMAGLV GTAVRRMQQL G* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 6.0e-45 | 75 | 306 | 232 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 6.0e-87 | 76 | 403 | 341 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16364.1 | 0 | 33 | 409 | 40 | 419 | unknown [Picea sitchensis] |
| RefSeq | NP_001044392.1 | 0 | 4 | 401 | 8 | 403 | Os01g0772500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131298.1 | 0 | 3 | 403 | 5 | 402 | hypothetical protein LOC100192611 [Zea mays] |
| RefSeq | XP_002310932.1 | 0 | 65 | 401 | 34 | 383 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458575.1 | 0 | 1 | 411 | 1 | 411 | hypothetical protein SORBIDRAFT_03g035990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000007 | 70 | 289 | 83 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000007 | 70 | 289 | 83 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000007 | 70 | 289 | 83 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000007 | 70 | 289 | 83 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000001 | 70 | 289 | 83 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
