| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g036080.1 |
| Family | GH47 |
| Protein Properties | Length: 584 Molecular Weight: 65231.1 Isoelectric Point: 6.2325 |
| Chromosome | Chromosome/Scaffold: 3 Start: 64106027 End: 64124437 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 51 | 477 | 0 |
| MFYHAFDGYMKYAFPLDELRPLSCQGEDSLGGYALTLIDSLDTLALLGDKEKFGAAVEWVGKNVRFDINKTVSVFETNIRILGGLLSAHLIASDYATGMR IQSYDDQLLHLAADLAQRLLPAFDTPTGIPFGSVNLMYGVDENESKITSTAGGGTLTLEFGILSRLTNNTVFERVTKKSVRGIWSRRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYKAAMHYLHHDPWYVEVNMNSGATVWPLFNSLQAFWPGLQVLAGDVDPAIRTHAAFFSV WKKYGFTPEGFNLATSTVQNGQRSYPLRPELIESTYWLFKATRDHRYLDVGRDILASLQYGARCPCGYCHIADVETHKQDDHMESFFLAETVKYLWLLFD LAAGPDNIVESGPYKYIFSTEGHLLPV | |||
| Full Sequence |
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| Protein Sequence Length: 584 Download |
| MQPIRRRHRG FPLLCLSAAL LAAATLLPGA AVAEGVTPSE ARRLRDEVKD MFYHAFDGYM 60 KYAFPLDELR PLSCQGEDSL GGYALTLIDS LDTLALLGDK EKFGAAVEWV GKNVRFDINK 120 TVSVFETNIR ILGGLLSAHL IASDYATGMR IQSYDDQLLH LAADLAQRLL PAFDTPTGIP 180 FGSVNLMYGV DENESKITST AGGGTLTLEF GILSRLTNNT VFERVTKKSV RGIWSRRSKL 240 NLVGAHINVF TGEWTQKDAG IGTSIDSFYE YLLKAYLLFG DEEYLYIFQE AYKAAMHYLH 300 HDPWYVEVNM NSGATVWPLF NSLQAFWPGL QVLAGDVDPA IRTHAAFFSV WKKYGFTPEG 360 FNLATSTVQN GQRSYPLRPE LIESTYWLFK ATRDHRYLDV GRDILASLQY GARCPCGYCH 420 IADVETHKQD DHMESFFLAE TVKYLWLLFD LAAGPDNIVE SGPYKYIFST EGHLLPVTPE 480 IALVDEHCSY FGAFCNGGAD HGYGASASST KHQNGNYTQL DDIQTHSSLY STSNVLFKTG 540 GYIKVTLMWF LINIFYSLVT AYVTFVDRKW NNSGLQCVKS KLF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 6.0e-70 | 45 | 479 | 471 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 3.0e-158 | 51 | 477 | 462 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD52943.1 | 0 | 34 | 544 | 38 | 547 | putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa Japonica Group] |
| GenBank | EEE55466.1 | 0 | 34 | 544 | 38 | 524 | hypothetical protein OsJ_03634 [Oryza sativa Japonica Group] |
| RefSeq | NP_001044401.1 | 0 | 34 | 544 | 46 | 555 | Os01g0773600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132501.1 | 0 | 1 | 544 | 1 | 543 | hypothetical protein LOC100193961 [Zea mays] |
| RefSeq | XP_002456427.1 | 0 | 1 | 583 | 1 | 583 | hypothetical protein SORBIDRAFT_03g036080 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 26 | 480 | 1 | 468 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayr_A | 0 | 32 | 449 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayq_A | 0 | 32 | 449 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayp_A | 0 | 32 | 449 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayo_A | 0 | 32 | 449 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
