| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g037670.1 |
| Family | GT47 |
| Protein Properties | Length: 500 Molecular Weight: 56281.7 Isoelectric Point: 9.0683 |
| Chromosome | Chromosome/Scaffold: 3 Start: 65615936 End: 65620911 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 113 | 423 | 0 |
| LRVYVYEMPGKFTYDLLRLFRDSYRDTDNLTSNGSPVHRLIEQHSIDYWLWADLIAPESQRLLKSVVRVQRQEEADIFYVPFFTTISYFLLEKQECKALY REALKWVTDQPAWQRSEGRDHVIPVHHPWSFKSVRRFVKKAIWLLPDMDSTGNWYKPGQVYLEKDVILPYVPNVDLCDHKCVLETQFKRSILLFFRGRLK RNAGGKIRSKLVEELKSAEDIVIEEGSAGAQGKAAAQDGMRKSLFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYREIALFVSSSDAVQ PGWLVKYLRGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MAGKQFPSPA HSRPASASSR RLLAAVAASL ILFTAFYFLL LSPSSHRPTP AILASPSATT 60 SFLASLDRFL SDPHPAASAA APGELDAAIR VQEEARLYGD EYPAWPAPAA GPLRVYVYEM 120 PGKFTYDLLR LFRDSYRDTD NLTSNGSPVH RLIEQHSIDY WLWADLIAPE SQRLLKSVVR 180 VQRQEEADIF YVPFFTTISY FLLEKQECKA LYREALKWVT DQPAWQRSEG RDHVIPVHHP 240 WSFKSVRRFV KKAIWLLPDM DSTGNWYKPG QVYLEKDVIL PYVPNVDLCD HKCVLETQFK 300 RSILLFFRGR LKRNAGGKIR SKLVEELKSA EDIVIEEGSA GAQGKAAAQD GMRKSLFCLS 360 PAGDTPSSAR LFDAIVSGCI PVIISDELEL PFEGILDYRE IALFVSSSDA VQPGWLVKYL 420 RGIDAKRIRE IQSNLVKYSR HFLYSSPAQP LGPEDLTWRM IAGKVVNIKL QIRRSQRLVR 480 ESRSVCTCEC RVGNTTRML* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-68 | 112 | 423 | 320 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25797.1 | 0 | 120 | 499 | 1 | 380 | unknown [Zea mays] |
| GenBank | EAY76230.1 | 0 | 49 | 487 | 46 | 488 | hypothetical protein OsI_04166 [Oryza sativa Indica Group] |
| RefSeq | NP_001044591.1 | 0 | 49 | 487 | 45 | 487 | Os01g0811400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001141657.1 | 0 | 1 | 499 | 1 | 497 | hypothetical protein LOC100273782 [Zea mays] |
| RefSeq | XP_002458661.1 | 0 | 1 | 499 | 1 | 499 | hypothetical protein SORBIDRAFT_03g037670 [Sorghum bicolor] |
