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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g038550.1 |
Family | AA1 |
Protein Properties | Length: 569 Molecular Weight: 62830.7 Isoelectric Point: 6.4612 |
Chromosome | Chromosome/Scaffold: 3 Start: 66461640 End: 66464165 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 25 | 554 | 0 |
AEVHHHEFVVQETPVKRLCKTHNIITVNGQFPGPMLEVREGDTLVINVVNRAQYNVTIHWHGIRQMRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGT LWWHAHSSWLRATVYGGLIIRPRENKTYPFAKPSREVPLILGEWWDANPIDVIREAQKTGGGPNVSDAFTINGQPGDLFKCSQKETTAIPVKAGETALLR FINAALNHELFVTIAQHKMTVVATDASYTKPFTTSVLMIAPGQTTDVLVTMDQAPTRYYVAARAYVSGQNVAFDNTTTTAVLEYDCGCASDFGPKIQPAF PALPAFNDTSAATAFAAGIKSPNRVKIHENVDEYLFFTVGLGLFNCKPGQLCKGPNNNTRFTASMNNVSFVFPKSDSLLHAHYYKVPGVFTTDFPAYPPV QFDYTGNVSQALWQPVPGTKLYPLRFGSVVQVVLQDTSIVTPENHPIHIHGYDFFILAEGFGNFDPKKDVEKFNYVDPPQRNTVAVPVNGWAVIQFVADN PGVWLMHCHLDVHITWGLAMAFLVEDGYGE |
Full Sequence |
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Protein Sequence Length: 569 Download |
MASLSSTWLL LLLSCLALAL LAADAEVHHH EFVVQETPVK RLCKTHNIIT VNGQFPGPML 60 EVREGDTLVI NVVNRAQYNV TIHWHGIRQM RTGWADGPEF VTQCPIKPGG SYKYRFTIEG 120 QEGTLWWHAH SSWLRATVYG GLIIRPRENK TYPFAKPSRE VPLILGEWWD ANPIDVIREA 180 QKTGGGPNVS DAFTINGQPG DLFKCSQKET TAIPVKAGET ALLRFINAAL NHELFVTIAQ 240 HKMTVVATDA SYTKPFTTSV LMIAPGQTTD VLVTMDQAPT RYYVAARAYV SGQNVAFDNT 300 TTTAVLEYDC GCASDFGPKI QPAFPALPAF NDTSAATAFA AGIKSPNRVK IHENVDEYLF 360 FTVGLGLFNC KPGQLCKGPN NNTRFTASMN NVSFVFPKSD SLLHAHYYKV PGVFTTDFPA 420 YPPVQFDYTG NVSQALWQPV PGTKLYPLRF GSVVQVVLQD TSIVTPENHP IHIHGYDFFI 480 LAEGFGNFDP KKDVEKFNYV DPPQRNTVAV PVNGWAVIQF VADNPGVWLM HCHLDVHITW 540 GLAMAFLVED GYGELQSLEP PPVDLPMC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-55 | 33 | 148 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-68 | 43 | 546 | 542 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-74 | 43 | 546 | 536 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-89 | 43 | 546 | 544 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 26 | 568 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28316.1 | 0 | 15 | 568 | 17 | 571 | unknown [Zea mays] |
GenBank | EEC71732.1 | 0 | 1 | 568 | 1 | 599 | hypothetical protein OsI_04280 [Oryza sativa Indica Group] |
RefSeq | NP_001044679.1 | 0 | 18 | 568 | 18 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148479.1 | 0 | 15 | 568 | 16 | 572 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456566.1 | 0 | 1 | 568 | 1 | 568 | hypothetical protein SORBIDRAFT_03g038550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 25 | 546 | 1 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asq_A | 0 | 25 | 546 | 1 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_B | 0 | 25 | 546 | 1 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_A | 0 | 25 | 546 | 1 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1aso_B | 0 | 25 | 546 | 1 | 521 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |