| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g039520.1 |
| Family | AA1 |
| Protein Properties | Length: 580 Molecular Weight: 63139.5 Isoelectric Point: 7.859 |
| Chromosome | Chromosome/Scaffold: 3 Start: 67197923 End: 67201832 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 29 | 567 | 0 |
| TRHYDFNVTMANVTRLCASKSIITVNGQFPGPKIVAREGDRLVIRVTNHAQHNISLHWHGIRQLRTGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLW WHAHISWLRATVYGPLVVLPKLGVPYPFPAPYKEVPVIFGEWWLADTEVVIQQALQLGAGPNVSDAHTINGLPGPLYNCSAKDTFKLKVKPGKTYMLRLI NAALNDELFFSIANHSLTVVEVDAVYVKPFTVDTLVIAPGQTTNVLLAAKPFYPAANYYMTARTYSTGRPATFDNTTVAGILEYEYPDAPSAAASFNKAL PLYRPALPQLNDTSFVGNFTAKLLSLATPEYPAAVPQTVDKRFFFTVGLGTHPCPANTTCQGPTNTTQFAASVNNVSFVLPTKALLHSHFAGLSSGVYES DFPVAPLAPFNYTGTPPNNTNVANGTKLMVIPYGTNVELVMQGTSILGIESHPLHLHGFNFFVVGQGYGNYDPVNDPPKFNLVDPVERNTVGVPAGGWVA IRFLADNPGVWFMHCHLEVHTTWGLRMAWLVLDGSLPHQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 580 Download |
| MAISSALPCS LLMAALMLLA SAVEVQGITR HYDFNVTMAN VTRLCASKSI ITVNGQFPGP 60 KIVAREGDRL VIRVTNHAQH NISLHWHGIR QLRTGWADGP AYITQCPIQT GQSYVYNYTI 120 VGQRGTLWWH AHISWLRATV YGPLVVLPKL GVPYPFPAPY KEVPVIFGEW WLADTEVVIQ 180 QALQLGAGPN VSDAHTINGL PGPLYNCSAK DTFKLKVKPG KTYMLRLINA ALNDELFFSI 240 ANHSLTVVEV DAVYVKPFTV DTLVIAPGQT TNVLLAAKPF YPAANYYMTA RTYSTGRPAT 300 FDNTTVAGIL EYEYPDAPSA AASFNKALPL YRPALPQLND TSFVGNFTAK LLSLATPEYP 360 AAVPQTVDKR FFFTVGLGTH PCPANTTCQG PTNTTQFAAS VNNVSFVLPT KALLHSHFAG 420 LSSGVYESDF PVAPLAPFNY TGTPPNNTNV ANGTKLMVIP YGTNVELVMQ GTSILGIESH 480 PLHLHGFNFF VVGQGYGNYD PVNDPPKFNL VDPVERNTVG VPAGGWVAIR FLADNPGVWF 540 MHCHLEVHTT WGLRMAWLVL DGSLPHQKLL PPPSDLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-53 | 35 | 149 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 9.0e-72 | 45 | 553 | 539 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 5.0e-85 | 25 | 555 | 556 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-95 | 29 | 548 | 547 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 27 | 579 | 554 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN28855.1 | 0 | 1 | 579 | 3 | 585 | unknown [Zea mays] |
| RefSeq | NP_001044772.1 | 0 | 24 | 579 | 25 | 579 | Os01g0842400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105875.1 | 0 | 1 | 579 | 1 | 587 | putative laccase [Zea mays] |
| RefSeq | NP_001146658.1 | 0 | 1 | 579 | 1 | 584 | hypothetical protein LOC100280258 [Zea mays] |
| RefSeq | XP_002458746.1 | 0 | 1 | 579 | 1 | 579 | hypothetical protein SORBIDRAFT_03g039520 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 30 | 553 | 4 | 517 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asq_A | 0 | 30 | 553 | 4 | 517 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_B | 0 | 30 | 553 | 4 | 517 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_A | 0 | 30 | 553 | 4 | 517 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1aso_B | 0 | 30 | 553 | 4 | 517 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
