| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g039960.1 |
| Family | AA1 |
| Protein Properties | Length: 566 Molecular Weight: 61235.2 Isoelectric Point: 5.9794 |
| Chromosome | Chromosome/Scaffold: 3 Start: 67603365 End: 67606472 |
| Description | laccase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 21 | 556 | 0 |
| AATVEHTFNVATLSWPCICQPGNISITAVDGVPGPVIQANEGDTVVVHVINDSPHDITVHWHGVFQRGTPWADGPSMVTQCPICPGHRYTYRFNITGQEG TLWWHAHSSFLRATVYGALIIRPRSGNSYPFPAPAEEKTVLLGEWWNAETVAANASVADAYTINGRPGDSYSCETAAKRIEKFEVRGNSTYLLRIINAAL NTAFFFRVAGHTFTVVAADASYTTRYETDVIVVAPGQTVDALMAADASPGRYYMAISSYQSAVPLRPGSYNSNITTAVVEYIGAASGGKQQQALPEMPEQ NDTATANRFYTSLTALVRPGRRTVPLAVDTRMFVTVGLGFSSCDQASCPVVASMNNQSFKLPDPEAMSMLDARYRNTPGGVYTRDFPDQPPVAFDYTNET NRLLLGGVAAALLFPGEASTKVRTLAYNATVEMVLQNTALVGRESHPMHLHGFNFFVLAQGFGNYDDGGTAGERQFNLVNPQERNTIAVPTGGWAVIRFV ADNPGMWFMHCHIDAHLTIGLAMVFEVEDGPSTKLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MPRSWMILLL AVCSAAALAQ AATVEHTFNV ATLSWPCICQ PGNISITAVD GVPGPVIQAN 60 EGDTVVVHVI NDSPHDITVH WHGVFQRGTP WADGPSMVTQ CPICPGHRYT YRFNITGQEG 120 TLWWHAHSSF LRATVYGALI IRPRSGNSYP FPAPAEEKTV LLGEWWNAET VAANASVADA 180 YTINGRPGDS YSCETAAKRI EKFEVRGNST YLLRIINAAL NTAFFFRVAG HTFTVVAADA 240 SYTTRYETDV IVVAPGQTVD ALMAADASPG RYYMAISSYQ SAVPLRPGSY NSNITTAVVE 300 YIGAASGGKQ QQALPEMPEQ NDTATANRFY TSLTALVRPG RRTVPLAVDT RMFVTVGLGF 360 SSCDQASCPV VASMNNQSFK LPDPEAMSML DARYRNTPGG VYTRDFPDQP PVAFDYTNET 420 NRLLLGGVAA ALLFPGEAST KVRTLAYNAT VEMVLQNTAL VGRESHPMHL HGFNFFVLAQ 480 GFGNYDDGGT AGERQFNLVN PQERNTIAVP TGGWAVIRFV ADNPGMWFMH CHIDAHLTIG 540 LAMVFEVEDG PSTKLPAPPP DLPQC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-44 | 45 | 146 | 105 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-64 | 24 | 545 | 563 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-65 | 46 | 546 | 531 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-80 | 23 | 546 | 557 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 26 | 565 | 558 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 18 | 565 | 100 | 657 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE55676.1 | 0 | 30 | 548 | 11 | 541 | hypothetical protein OsJ_04090 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q5N7A3 | 0 | 1 | 548 | 1 | 561 | LAC6_ORYSJ RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Urishiol oxidase 6; AltName: Full=Diphenol oxidase 6; Flags: Precursor |
| RefSeq | XP_002442097.1 | 0 | 2 | 565 | 4 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| RefSeq | XP_002456639.1 | 0 | 1 | 565 | 1 | 565 | hypothetical protein SORBIDRAFT_03g039960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 25 | 545 | 5 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asq_A | 0 | 25 | 545 | 5 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_B | 0 | 25 | 545 | 5 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_A | 0 | 25 | 545 | 5 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1aso_B | 0 | 25 | 545 | 5 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
