| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g039980.1 |
| Family | AA1 |
| Protein Properties | Length: 558 Molecular Weight: 60246.1 Isoelectric Point: 6.9799 |
| Chromosome | Chromosome/Scaffold: 3 Start: 67615230 End: 67617757 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 24 | 543 | 0 |
| AAVVEHTFNVGGMSISQLCMNSVIYTVNQQMPGPTIEVNEGDTLVVHVVNGSPYPVSVHWHGIFQLRSGWADGANMITQCPIQPSAKFTYAFNITGQEGT LWWHAHASMLRATIYGALIIKPRNGPRGYPFPKPYAEIPILLGEWWNKNVDDVEKDGLLTGLGPAMSDAFTINGFTGEQPSCRGAGAYQVEVESGKTYLL RIINAAVDSELFFKVAGHAFTVVAADASYTNPYPTDVIVIAPGQTVDALMTASAAPGRYLMAAHAFESKTAANPPPFDNTTATAVVRYKGVPDYAPAAMP ALPAHTDVVTAGRFYWSMTGLVRRGDPVVPRNVDHSMVVAFGLDQVPCAPEQTKCQGFAVVASMNRYSFRFPDKVSLLEAFFRGVPNVYSEDFPGAPPPV PAPRKVTSVRKVNFNDVVEVVLQSQEYSSALGTENHPIHLHGFNFFVLAQGLGRFDASMKSKYNLVNPQVRNTIAVPAGGWAVIRFTADNPGMWFMHCHF DMHLPLGLAMVFEVLDGPAP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MARAAKLLAL LIAALCTAAT MANAAVVEHT FNVGGMSISQ LCMNSVIYTV NQQMPGPTIE 60 VNEGDTLVVH VVNGSPYPVS VHWHGIFQLR SGWADGANMI TQCPIQPSAK FTYAFNITGQ 120 EGTLWWHAHA SMLRATIYGA LIIKPRNGPR GYPFPKPYAE IPILLGEWWN KNVDDVEKDG 180 LLTGLGPAMS DAFTINGFTG EQPSCRGAGA YQVEVESGKT YLLRIINAAV DSELFFKVAG 240 HAFTVVAADA SYTNPYPTDV IVIAPGQTVD ALMTASAAPG RYLMAAHAFE SKTAANPPPF 300 DNTTATAVVR YKGVPDYAPA AMPALPAHTD VVTAGRFYWS MTGLVRRGDP VVPRNVDHSM 360 VVAFGLDQVP CAPEQTKCQG FAVVASMNRY SFRFPDKVSL LEAFFRGVPN VYSEDFPGAP 420 PPVPAPRKVT SVRKVNFNDV VEVVLQSQEY SSALGTENHP IHLHGFNFFV LAQGLGRFDA 480 SMKSKYNLVN PQVRNTIAVP AGGWAVIRFT ADNPGMWFMH CHFDMHLPLG LAMVFEVLDG 540 PAPNLLPPPP AGFPKCH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 2.0e-50 | 29 | 519 | 502 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 2.0e-63 | 26 | 535 | 539 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-68 | 42 | 536 | 532 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-83 | 26 | 536 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 29 | 539 | 527 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD82649.1 | 0 | 28 | 515 | 25 | 511 | putative laccase LAC6-8 [Oryza sativa Japonica Group] |
| GenBank | EEC71812.1 | 0 | 28 | 557 | 25 | 553 | hypothetical protein OsI_04450 [Oryza sativa Indica Group] |
| RefSeq | NP_001044816.1 | 0 | 28 | 515 | 25 | 511 | Os01g0850800 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q0JHP8 | 0 | 28 | 557 | 25 | 553 | LAC8_ORYSJ RecName: Full=Laccase-8; AltName: Full=Benzenediol:oxygen oxidoreductase 8; AltName: Full=Urishiol oxidase 8; AltName: Full=Diphenol oxidase 8; Flags: Precursor |
| RefSeq | XP_002456641.1 | 0 | 1 | 557 | 1 | 557 | hypothetical protein SORBIDRAFT_03g039980 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 24 | 535 | 1 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asq_A | 0 | 24 | 535 | 1 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_B | 0 | 24 | 535 | 1 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_A | 0 | 24 | 535 | 1 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1aso_B | 0 | 24 | 535 | 1 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
