| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g041450.1 |
| Family | GH35 |
| Protein Properties | Length: 844 Molecular Weight: 93853.6 Isoelectric Point: 6.9001 |
| Chromosome | Chromosome/Scaffold: 3 Start: 68961033 End: 68971402 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 36 | 340 | 0 |
| LIISGRRRLIISTSIHYPRSVPEMWPKLVAEAKDGGADCIETYVFWNGHEIAPGQYYFEDRFDLVRFVKVVKDAGLLLILRIGPFVAAEWNFGGVPVWLH YVPGTVFRTDNEPFKSHMKSFTTYIVNMMKKEQLFASQGGNIILAQIENEYGDYYEQAYAPGGKPYAMWAASMAVAQNTGVPWIMCQESDAPDPVINSCN GFYCDGFQPNSPTKPKLWTENWPGWFQTFGESNPHRPPEDVAFAVARFFEKGGSVQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRFPKWAHL RDLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 844 Download |
| MAAAAASFSA LPFLLLLLLV PSLDAASNVT YDHRSLIISG RRRLIISTSI HYPRSVPEMW 60 PKLVAEAKDG GADCIETYVF WNGHEIAPGQ YYFEDRFDLV RFVKVVKDAG LLLILRIGPF 120 VAAEWNFGGV PVWLHYVPGT VFRTDNEPFK SHMKSFTTYI VNMMKKEQLF ASQGGNIILA 180 QIENEYGDYY EQAYAPGGKP YAMWAASMAV AQNTGVPWIM CQESDAPDPV INSCNGFYCD 240 GFQPNSPTKP KLWTENWPGW FQTFGESNPH RPPEDVAFAV ARFFEKGGSV QNYYVYHGGT 300 NFGRTTGGPF ITTSYDYDAP IDEYGLRRFP KWAHLRDLHK SIRLCEHTLL YGNTTFLSLG 360 PKQEADIYSD QSGGCVAFLA NIDSANDKVV TFRNRQYDLP AWSVSILPDC RNVVFNTAKV 420 QSQTSMVAMV PESLQASKPE RWNIFRERTG IWGKNDFVRN GFVDHINTTK DSTDYLWYTT 480 SFSVDESYSK GSHVVLNIDS KGHGVHAFLN NEFIGSAYGN GSQSSFSVKL PINLRTGKNE 540 LALLSMTVGL QNAGFSYEWI GAGFTNVNIS GVRNGTINLS SNNWAYKIGL EGEYYSLFKP 600 DQRNNQRWIP QSEPPKNQPL TWYKVNVDVP QGDDPVGIDM QSMGKGLVWL NGNAIGRYWP 660 RTSSIDDRCT PSCDYRGEFN PNKCRTGCGQ PTQRWYHIPR SWFHPSGNIL VIFEEKGGDP 720 TKITFSRRAV TSVCSFVSEH FPSIDLESWD GSATNEGTSP AKAQLSCPIG KNISSLKFAS 780 LGTPSGTCRS YQKGSCHHPN SLSVVEKACL NTNSCTVSLS DESFGKDLCP GVTKTLAIEA 840 DCS* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 3.0e-5 | 463 | 543 | 83 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 5.0e-10 | 51 | 332 | 339 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 1.0e-19 | 765 | 842 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-141 | 51 | 342 | 306 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 843 | 822 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAG95687.1 | 0 | 25 | 843 | 102 | 919 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEC71891.1 | 0 | 27 | 843 | 36 | 851 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
| RefSeq | NP_001044964.1 | 0 | 25 | 843 | 34 | 851 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151478.1 | 0 | 22 | 843 | 22 | 844 | beta-galactosidase [Zea mays] |
| RefSeq | XP_002456725.1 | 0 | 22 | 843 | 22 | 843 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 4.99983e-42 | 35 | 586 | 14 | 598 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.006 | 469 | 659 | 374 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 7e-34 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 7e-34 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 7e-34 | 38 | 325 | 12 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
