| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g041540.1 |
| Family | GT31 |
| Protein Properties | Length: 1146 Molecular Weight: 127660 Isoelectric Point: 7.1228 |
| Chromosome | Chromosome/Scaffold: 3 Start: 69040899 End: 69051653 |
| Description | mitotic checkpoint family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 829 | 1026 | 0 |
| KRRDSLRDTWVPRGDKLRKLEQEKGIVIRFVIGHSGTPGGGALDRALDAEEAETRDFLRLDHAEGYHELSSKTRTYFTTAVATWDADFYVKVDDDIHLNL GMLSSRLAKHRTRPRVYVGCMKSGPVLSQKGVKYHEPEYWKFGDEGNKYFRHATGQIYAISKDLAAYISINQPILHRFANEDVSLGAWLIGLEVEHVD | |||
| Full Sequence |
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| Protein Sequence Length: 1146 Download |
| MILRTPPQRK RRAGSSAGDD ADLALVKSVG GASATGRSPV SDRRLVLYDR PTALVPADAP 60 GEPFDDMVCT YHCRQMVKSE FMVALDTAEK QVQEYQTKLV ALEEQLTKSE DERMQFLDKL 120 NYVEQELAAT KGRESSLQER LLKELSEYQE RYRGQARLNK ETGSRISAES SVSSAKELIK 180 DLEGNLHRLS ESSEREKKTL KKELSYVKED LSLSASKNNA ELEKTRLRAE NYESEAKLLN 240 EQLTNLKKQL DECLREKNEM ELKLLNSSAL LNQNASTDDQ KLIKLLQEEL RNYEKEVHEA 300 KRLKSSHTNV ELLKEKLLEE QGRRERAELE LSKLQEIDAK AHKLELELAS CTALLSNIPD 360 VSSYADIPQK IADLQKQALT NLNKVGEVTS RLKELEVALE FADLSKQRAE GEATLAKERA 420 ETATREVKRL ELMLAAISEE RDKLRKEHPT ESDQSGMEKT IRELESIIHE LKELISHKDT 480 ELNIMNERLS LETRKVKSLE REGDQLRSQV ALLESKLGHG DYSASSTKVL RMVNTLGVDN 540 EAKQTIEALQ AELKKTKERL QAVEELKGQA DAGTVVDANI AEKLAQLKNQ IATLEKREER 600 YKAVFAERIS VFRKACCSLF GYKIVMNDQQ QSNGIPVTRF ILQSVYAQSD DEKLEFDYES 660 GSTNIVVNDY TSQHEIAQQL QALTERQPQL EKKPPRGKAP LSGKAVVALC VTSFVVGLLL 720 SGNVSLMSAS ASVSSSRDSA ENEKSIRVSG CDNKRKLGEN HPNDLLNEVS RTHEAIQSLD 780 KAVSTLEMEM AVERARSGGG SGAAVASGGR TPQKAFVVVG INTAFTSKKR RDSLRDTWVP 840 RGDKLRKLEQ EKGIVIRFVI GHSGTPGGGA LDRALDAEEA ETRDFLRLDH AEGYHELSSK 900 TRTYFTTAVA TWDADFYVKV DDDIHLNLGM LSSRLAKHRT RPRVYVGCMK SGPVLSQKGV 960 KYHEPEYWKF GDEGNKYFRH ATGQIYAISK DLAAYISINQ PILHRFANED VSLGAWLIGL 1020 EVEHVDDRSM CCATPPACGC VSVCAQTASG RSELGTCAWR PSTGRAAASA SRWTGCGTST 1080 RRAAKAKGPS GTPPHEIGYL AGTVDVCVEL HLLASNFLKM RRREGRALEP LFTMNIPHGE 1140 YGRFT* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1196 | Smc | 5.0e-12 | 233 | 617 | 398 | + Chromosome segregation ATPases [Cell division and chromosome partitioning] | ||
| pfam13334 | DUF4094 | 2.0e-13 | 741 | 793 | 53 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 6.0e-40 | 829 | 1028 | 206 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam05557 | MAD | 3.0e-76 | 84 | 681 | 674 | + Mitotic checkpoint protein. This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated. | ||
| PLN03193 | PLN03193 | 1.0e-128 | 741 | 1038 | 308 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0016032 | viral reproduction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL53751.1 | 0 | 675 | 1038 | 3 | 365 | unknown [Zea mays] |
| RefSeq | NP_001044974.1 | 0 | 684 | 1038 | 7 | 361 | Os01g0877400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149873.1 | 0 | 675 | 1038 | 3 | 368 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
| RefSeq | NP_001151757.1 | 0 | 1 | 686 | 1 | 694 | LOC100285392 [Zea mays] |
| RefSeq | XP_002456730.1 | 0 | 1 | 1145 | 1 | 1145 | hypothetical protein SORBIDRAFT_03g041540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dzo_B | 0.0001 | 581 | 662 | 3 | 76 | A Chain A, Structure Of Human Mad1 C-Terminal Domain Reveals Its Involvement In Kinetochore Targeting |
| PDB | 4dzo_A | 0.0001 | 581 | 662 | 3 | 76 | A Chain A, Structure Of Human Mad1 C-Terminal Domain Reveals Its Involvement In Kinetochore Targeting |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR813135 | 320 | 336 | 655 | 0 |
| JG951668 | 300 | 381 | 680 | 0 |
| AB194869 | 268 | 378 | 645 | 0 |
| DR822874 | 286 | 306 | 591 | 0 |
| GO839110 | 317 | 378 | 677 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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