| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g041680.1 |
| Family | CE8 |
| Protein Properties | Length: 507 Molecular Weight: 53948.1 Isoelectric Point: 7.9472 |
| Chromosome | Chromosome/Scaffold: 3 Start: 69172299 End: 69174991 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 279 | 499 | 0 |
| GVLADGFMARDLTIANTAGPDAHQAVAFRSTGDRTVLDGVELLGHQDTLYAHAMRQFYTRCRVAGTVDFVFGNSATVLHDTALVVLPRQLRPEKGENDAV TAQGRTDPAQPTGIVLSRCAVNGSDEFLALYRENPGVHHVYLGRPWKEYSRTVYLGCTLAEIVQPQGWMPWNGDFALKTLYYGEYDSAGPGAGAASRRVA WSSKVPKEHVDAYSVANFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 507 Download |
| MPPAIRLLPL LILVLFHLPV SLSSRHHRQR PPSPSPAPAS SDSAPLAALL ACNATRFQPA 60 CVSTLSGAAS DASTADLLAA TLSTLRARLP PAVTTAKSVL ASSSNVNLTT AATNCLTFLA 120 LSSHRLSPSP SPSLISASTA MLHLYDCWSA YKYVNFSRTI SDAMAYLDAT ITVNSNYISM 180 LAARQRYGDD TSLWRPPQTE RDGYWPPPAA AASKAADVDA LGVPKGLPAN ATVCGAGCDY 240 KTVREAVAAA PDYGDGAFVV HVKEGPSLIH GKSSCRGAGV LADGFMARDL TIANTAGPDA 300 HQAVAFRSTG DRTVLDGVEL LGHQDTLYAH AMRQFYTRCR VAGTVDFVFG NSATVLHDTA 360 LVVLPRQLRP EKGENDAVTA QGRTDPAQPT GIVLSRCAVN GSDEFLALYR ENPGVHHVYL 420 GRPWKEYSRT VYLGCTLAEI VQPQGWMPWN GDFALKTLYY GEYDSAGPGA GAASRRVAWS 480 SKVPKEHVDA YSVANFIQGH EWIPKV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 4.0e-70 | 226 | 504 | 322 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 3.0e-71 | 235 | 505 | 312 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-75 | 224 | 503 | 317 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-100 | 230 | 499 | 306 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 23 | 506 | 532 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR35661.1 | 0 | 279 | 506 | 26 | 252 | unknown [Zea mays] |
| GenBank | EAY76707.1 | 0 | 32 | 506 | 30 | 539 | hypothetical protein OsI_04662 [Oryza sativa Indica Group] |
| RefSeq | NP_001044992.1 | 0 | 32 | 506 | 30 | 539 | Os01g0880300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002458861.1 | 0 | 1 | 506 | 1 | 506 | hypothetical protein SORBIDRAFT_03g041680 [Sorghum bicolor] |
| RefSeq | XP_002517239.1 | 0 | 21 | 504 | 20 | 549 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 227 | 503 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 235 | 503 | 15 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00000000000002 | 230 | 476 | 5 | 317 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000002 | 230 | 476 | 5 | 317 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000004 | 230 | 476 | 5 | 317 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
