| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g042690.1 |
| Family | GH1 |
| Protein Properties | Length: 609 Molecular Weight: 68646.2 Isoelectric Point: 7.8916 |
| Chromosome | Chromosome/Scaffold: 3 Start: 70032110 End: 70039048 |
| Description | beta glucosidase 42 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 137 | 597 | 0 |
| RADFPDGFVFGVATSAYQIEGARREGGKGDSIWDVFTDDKERVLDKSNAEIAVDHYHRYKEDIELMASLGFSAYRFSISWARIFPDGLGEKVNEQGVAFY NDLINFMISKGIEPYATLYHWDLPNNLQKTLGGWISDKIVEYFALYAEACFANFGDRVKRWITINEPLQTAINGYGIGIFAPGGCQGETARCYLAAHHQI LAHAAAVDVYRRKFKAAQGGEVGFVVDCEWAEPFSEKAEDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYT SRLIAHHQNPDDVYFYQVQQMERIEKWNSGEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMDDEDDQSATLDQVLNDTTRVGYFKGYLN SVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRFLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 609 Download |
| MERTNCHTGH SALGSASPAR PMLSRLARVT PPSIGRQGRH AVVAAHVFSP CALAGRGKRR 60 VCRLPLRANA NVRRQRHLLI DTPHRNPKAH ASEFTNSSSS PRRDRSHAFH SSAPATPPLS 120 PPAGAMGSTG RDPEVTRADF PDGFVFGVAT SAYQIEGARR EGGKGDSIWD VFTDDKERVL 180 DKSNAEIAVD HYHRYKEDIE LMASLGFSAY RFSISWARIF PDGLGEKVNE QGVAFYNDLI 240 NFMISKGIEP YATLYHWDLP NNLQKTLGGW ISDKIVEYFA LYAEACFANF GDRVKRWITI 300 NEPLQTAING YGIGIFAPGG CQGETARCYL AAHHQILAHA AAVDVYRRKF KAAQGGEVGF 360 VVDCEWAEPF SEKAEDQIAA QRRIDFQLGW YLDPIYFGDY PESMRQRLGS DLPTFSEKDK 420 EFIRNKIDFI GLNHYTSRLI AHHQNPDDVY FYQVQQMERI EKWNSGEKIG ERAASEWLFI 480 VPWGLRKVLN YIVKKYNNPV IYITENGMDD EDDQSATLDQ VLNDTTRVGY FKGYLNSVAQ 540 AIKDGADIRG YFAWSFLDNF EWAMGYTKRF GIVYVDYKNG LSRHPKASAL WFSRFLKGEA 600 AENKPDTN* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 2.0e-120 | 128 | 601 | 492 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 5.0e-127 | 136 | 598 | 476 | + beta-glucosidase | ||
| COG2723 | BglB | 8.0e-147 | 140 | 592 | 460 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 4.0e-165 | 141 | 592 | 452 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 0 | 140 | 598 | 462 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABW76289.1 | 0 | 134 | 597 | 20 | 483 | beta-glucosidase G4 [Medicago truncatula] |
| GenBank | EEC71957.1 | 0 | 126 | 608 | 1 | 472 | hypothetical protein OsI_04787 [Oryza sativa Indica Group] |
| RefSeq | NP_001045089.1 | 0 | 126 | 608 | 1 | 483 | Os01g0897600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146483.1 | 0 | 126 | 601 | 1 | 476 | hypothetical protein LOC100280071 [Zea mays] |
| RefSeq | XP_002456785.1 | 0 | 1 | 608 | 1 | 608 | hypothetical protein SORBIDRAFT_03g042690 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 135 | 597 | 12 | 487 | A Chain A, Crystal Structure Of Holo Fepb |
| PDB | 3gnp_A | 0 | 135 | 597 | 12 | 487 | A Chain A, Crystal Structure Of Holo Fepb |
| PDB | 3gno_A | 0 | 135 | 597 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 135 | 597 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 135 | 597 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR970424 | 292 | 124 | 415 | 0 |
| JG798933 | 252 | 227 | 478 | 0 |
| CN127707 | 256 | 107 | 362 | 0 |
| CO439814 | 248 | 315 | 562 | 0 |
| FL918803 | 239 | 360 | 598 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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