| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g045510.1 |
| Family | GH17 |
| Protein Properties | Length: 342 Molecular Weight: 35834.9 Isoelectric Point: 5.2779 |
| Chromosome | Chromosome/Scaffold: 3 Start: 72752440 End: 72754277 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 32 | 338 | 0 |
| GVCYGTVADDLPPPSEVVQLYKSNGISTMRVYFPDSKVMEALRGSGIGLVLGVANEDIANLAACAPCAASWVQTNVRTYHPDVSVLYIAVGNEVDAPAAA QSILPAMRNLQAALAAAGLDGDIKVSTCVKLDVVTNTFPPSSGVFAQAYMTDIARFLAATGAPLLANVYPYFAYRGSNPGDISLSYALFQPGTTVRDGGS GLVYTNLLDAMVDSVHAALEKAGAPTVRVVVSETGWPSAGGAAATVQNAQTYVQNMIDHAGQGTPKKPGPLETYVFAMFNEDQKPGELTERNFGLFYPNK APVYPVV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| MAIMQGSFAH LVVGAIIVGV FASLLSGVHS YGVCYGTVAD DLPPPSEVVQ LYKSNGISTM 60 RVYFPDSKVM EALRGSGIGL VLGVANEDIA NLAACAPCAA SWVQTNVRTY HPDVSVLYIA 120 VGNEVDAPAA AQSILPAMRN LQAALAAAGL DGDIKVSTCV KLDVVTNTFP PSSGVFAQAY 180 MTDIARFLAA TGAPLLANVY PYFAYRGSNP GDISLSYALF QPGTTVRDGG SGLVYTNLLD 240 AMVDSVHAAL EKAGAPTVRV VVSETGWPSA GGAAATVQNA QTYVQNMIDH AGQGTPKKPG 300 PLETYVFAMF NEDQKPGELT ERNFGLFYPN KAPVYPVVFR R* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0003 | 257 | 331 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-145 | 32 | 339 | 312 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL35900.1 | 0 | 1 | 339 | 1 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
| GenBank | EAY77183.1 | 0 | 1 | 339 | 1 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
| RefSeq | NP_001045372.1 | 0 | 1 | 339 | 1 | 334 | Os01g0944700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001045373.1 | 0 | 27 | 340 | 5 | 315 | Os01g0944800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459079.1 | 0 | 1 | 341 | 1 | 341 | hypothetical protein SORBIDRAFT_03g045510 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 32 | 339 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 32 | 339 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 32 | 339 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 32 | 339 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 32 | 339 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
