| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g045630.1 |
| Family | GH17 |
| Protein Properties | Length: 318 Molecular Weight: 33390.7 Isoelectric Point: 4.9065 |
| Chromosome | Chromosome/Scaffold: 3 Start: 72846040 End: 72847257 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 6 | 315 | 0 |
| GVCYGVVGDNLPSRADVVQLCKSNNIQSMRIYFPDQAALAALRGSGIAVILDVGGVDAVRALAGSASVAADWVQANVQAYQRDVLIRYIAVGNEVGPGDG AAALLLPAMRNVHAALVSAGLDGSIKVSTAVKMDAFADTFPPSRGAFAQGYMADVARFLADTGAPLLANVYPYFAYRDDPRNISLEFASFRPGAATVTDG GNGLAYTNLLDAMVDAIYAALEKAGAPGVQVVVSESGWPSAGGFAASVDNARQYNQGVIDHVRQGTPRRPGLLETYVFAMFNENQKTGDEIERHFGLFNP DKTPVYPINF | |||
| Full Sequence |
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| Protein Sequence Length: 318 Download |
| MGGVHGVCYG VVGDNLPSRA DVVQLCKSNN IQSMRIYFPD QAALAALRGS GIAVILDVGG 60 VDAVRALAGS ASVAADWVQA NVQAYQRDVL IRYIAVGNEV GPGDGAAALL LPAMRNVHAA 120 LVSAGLDGSI KVSTAVKMDA FADTFPPSRG AFAQGYMADV ARFLADTGAP LLANVYPYFA 180 YRDDPRNISL EFASFRPGAA TVTDGGNGLA YTNLLDAMVD AIYAALEKAG APGVQVVVSE 240 SGWPSAGGFA ASVDNARQYN QGVIDHVRQG TPRRPGLLET YVFAMFNENQ KTGDEIERHF 300 GLFNPDKTPV YPINFPN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 234 | 307 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-143 | 14 | 315 | 306 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY77194.1 | 0 | 1 | 316 | 1 | 316 | hypothetical protein OsI_05163 [Oryza sativa Indica Group] |
| RefSeq | NP_001045385.1 | 0 | 1 | 316 | 1 | 316 | Os01g0946600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001045386.1 | 0 | 1 | 316 | 1 | 316 | Os01g0946700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441397.1 | 0 | 3 | 317 | 21 | 336 | hypothetical protein SORBIDRAFT_09g025890 [Sorghum bicolor] |
| RefSeq | XP_002456922.1 | 0 | 1 | 317 | 1 | 317 | hypothetical protein SORBIDRAFT_03g045630 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 6 | 315 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 6 | 315 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 6 | 315 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 6 | 315 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 6 | 315 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR739897 | 300 | 14 | 313 | 0 |
| DR739798 | 303 | 14 | 313 | 0 |
| CJ960024 | 280 | 37 | 315 | 0 |
| GO874911 | 295 | 14 | 307 | 0 |
| HX191066 | 263 | 14 | 274 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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