| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g001670.1 |
| Family | GT20 |
| Protein Properties | Length: 546 Molecular Weight: 59428.8 Isoelectric Point: 6.507 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1402484 End: 1404121 |
| Description | trehalose-phosphatase/synthase 9 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 23 | 508 | 0 |
| ARRIVVAHRLPLRAAEDPDTPFGFAFSLDPDAVAFQLSRGLPAPVTFIGTLPASAESKIIPSDELDNYLVEHFSCLPVYVDGARHNEFYNEFCKHYLWPL VHYLLPLSPAHDGDLHFDAGMYGTFLAVNKQFADRVIEVVSPDDGDLVVVHDYHLWVLPTFLRRKCPRAGVGFFLHSPFPSPEIFSAVPVRDDLLRGFLN ADLVGFQTADYARHFVACCSRHLGVSGGAWTGHTTGINYHGRTVVVKTLSVGLDLGRLRATLATPEAAAKAKEIAEAYRGRTLIVGVDDVDLFKGVKLKL LAMEKMLETHSDVHEQVVLVQINNPARSRGRDVDGVRGETQQILQRINTRFARAEETAPAAVVMIDGPVPMSEKVAYYAAADCCVVSAVRDGLNRVPYFY TACREEAPGARKHSAVVVSVFAGCSPTLRGAIRVDPWDLEGMADAMHAAVTTMSAEEKEARHRSNYEYLRANDAVTWAQVFDDALQ | |||
| Full Sequence |
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| Protein Sequence Length: 546 Download |
| MELELAPAPA PVPPVNGAGG PKARRIVVAH RLPLRAAEDP DTPFGFAFSL DPDAVAFQLS 60 RGLPAPVTFI GTLPASAESK IIPSDELDNY LVEHFSCLPV YVDGARHNEF YNEFCKHYLW 120 PLVHYLLPLS PAHDGDLHFD AGMYGTFLAV NKQFADRVIE VVSPDDGDLV VVHDYHLWVL 180 PTFLRRKCPR AGVGFFLHSP FPSPEIFSAV PVRDDLLRGF LNADLVGFQT ADYARHFVAC 240 CSRHLGVSGG AWTGHTTGIN YHGRTVVVKT LSVGLDLGRL RATLATPEAA AKAKEIAEAY 300 RGRTLIVGVD DVDLFKGVKL KLLAMEKMLE THSDVHEQVV LVQINNPARS RGRDVDGVRG 360 ETQQILQRIN TRFARAEETA PAAVVMIDGP VPMSEKVAYY AAADCCVVSA VRDGLNRVPY 420 FYTACREEAP GARKHSAVVV SVFAGCSPTL RGAIRVDPWD LEGMADAMHA AVTTMSAEEK 480 EARHRSNYEY LRANDAVTWA QVFDDALQVA CKDHSTTSFV GLGLGMSYRA AAIQPSSRTL 540 ATALL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02400 | trehalose_OtsA | 2.0e-93 | 24 | 508 | 491 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
| COG0380 | OtsA | 5.0e-97 | 24 | 510 | 497 | + Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | ||
| cd03788 | GT1_TPS | 1.0e-127 | 24 | 508 | 488 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| pfam00982 | Glyco_transf_20 | 3.0e-128 | 24 | 508 | 488 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PLN02205 | PLN02205 | 8.0e-134 | 22 | 541 | 535 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD09488.1 | 0 | 23 | 545 | 23 | 547 | putative trehalose-6-phosphate synthase [Oryza sativa Japonica Group] |
| DDBJ | BAD33622.1 | 0 | 24 | 545 | 118 | 644 | putative SL-TPS/P [Oryza sativa Japonica Group] |
| DDBJ | BAH94577.1 | 0 | 24 | 545 | 48 | 574 | Os09g0427800 [Oryza sativa Japonica Group] |
| GenBank | EAZ44803.1 | 0 | 24 | 545 | 48 | 574 | hypothetical protein OsJ_29437 [Oryza sativa Japonica Group] |
| RefSeq | XP_002453209.1 | 0 | 1 | 545 | 1 | 545 | hypothetical protein SORBIDRAFT_04g001670 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 3.00004e-41 | 108 | 503 | 73 | 446 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 3.00004e-41 | 108 | 503 | 73 | 446 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 3.00004e-41 | 108 | 503 | 73 | 446 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 3.00004e-41 | 108 | 503 | 73 | 446 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 4.00001e-41 | 108 | 503 | 74 | 447 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 513 | 46 | 541 | 0 |
| HO779327 | 486 | 67 | 542 | 0 |
| DT653950 | 278 | 43 | 318 | 0 |
| DT944686 | 254 | 65 | 318 | 0 |
| DV517190 | 274 | 47 | 318 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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