| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g001960.1 |
| Family | GH9 |
| Protein Properties | Length: 515 Molecular Weight: 54215.9 Isoelectric Point: 6.6955 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1681604 End: 1683518 |
| Description | cellulase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 37 | 506 | 0 |
| NYADALDKALLFFEAQRSGKLPPRPLQRVTWRGDSGLSDGSAAGVDLSGGYYDAGDNVKFGLPMAFTVTMLSWSVLEFMPGAAAGRAAVRWGADYLLKAA AAAPHALYVQVADPNRDHQCWERPEDMDTPRDVYKVTPDMPGSDVAGETAAALAAASLVFRTCDPAYSAKLLQTAQKVFDFADRYRGSYSDSLSSVACPF YCSYSGYHDELLWAAAWLHMATAAAAAPAGNSSSDVYLSYIYSNGHNLGAEQDDFTFSWDDKRVGTKVLLSKAFLQGKGNVDALRVYKAHADTYVCSLVP GAGGSQSSSSQFTPGGLLFKEGDSNMQYVTSTAFLLLAHAKSLAGAGAMVSCGGAAVPASALVAVAKRQVDYILGANPAAMSYMVGFGARYPRHVHHRGA SMPSVRDHPARIACDEGFRYLHSSDPDANVLVGAVVGGPDGSDAFTDSRDNFAQTEPSTYTNAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 515 Download |
| MAPMRRSSSK AMVSSLAVAL AAVLCLTAGG NGVAAFNYAD ALDKALLFFE AQRSGKLPPR 60 PLQRVTWRGD SGLSDGSAAG VDLSGGYYDA GDNVKFGLPM AFTVTMLSWS VLEFMPGAAA 120 GRAAVRWGAD YLLKAAAAAP HALYVQVADP NRDHQCWERP EDMDTPRDVY KVTPDMPGSD 180 VAGETAAALA AASLVFRTCD PAYSAKLLQT AQKVFDFADR YRGSYSDSLS SVACPFYCSY 240 SGYHDELLWA AAWLHMATAA AAAPAGNSSS DVYLSYIYSN GHNLGAEQDD FTFSWDDKRV 300 GTKVLLSKAF LQGKGNVDAL RVYKAHADTY VCSLVPGAGG SQSSSSQFTP GGLLFKEGDS 360 NMQYVTSTAF LLLAHAKSLA GAGAMVSCGG AAVPASALVA VAKRQVDYIL GANPAAMSYM 420 VGFGARYPRH VHHRGASMPS VRDHPARIAC DEGFRYLHSS DPDANVLVGA VVGGPDGSDA 480 FTDSRDNFAQ TEPSTYTNAP LVGALAFFAA GRHR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 9.0e-158 | 25 | 506 | 491 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 7.0e-159 | 37 | 506 | 477 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 5.0e-163 | 37 | 510 | 480 | + cellulase | ||
| PLN02308 | PLN02308 | 1.0e-174 | 34 | 510 | 480 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 32 | 509 | 481 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ05384.1 | 0 | 35 | 509 | 33 | 500 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
| GenBank | EAZ21561.1 | 0 | 12 | 514 | 1 | 484 | hypothetical protein OsJ_05189 [Oryza sativa Japonica Group] |
| RefSeq | NP_001045737.1 | 0 | 12 | 514 | 1 | 499 | Os02g0123700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060848.1 | 0 | 35 | 509 | 52 | 519 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451429.1 | 0 | 1 | 514 | 1 | 514 | hypothetical protein SORBIDRAFT_04g001960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 35 | 510 | 2 | 430 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1ksc_A | 0 | 35 | 510 | 2 | 430 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1ks8_A | 0 | 35 | 510 | 2 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 35 | 508 | 3 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 35 | 508 | 3 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
