| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g002570.1 |
| Family | GH3 |
| Protein Properties | Length: 663 Molecular Weight: 71917.7 Isoelectric Point: 7.8629 |
| Chromosome | Chromosome/Scaffold: 4 Start: 2333767 End: 2339400 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 135 | 369 | 0 |
| SSTRLGIPVMFGIDAVHGHGYVYKATVFPHNVGLGCTRDPELARKIGAAVALEVRATGIPFIFAPCLAVCRDPRWGRCYESFSEHPELVQNMTSIVSGFQ GEIPATGRLGTPYVAGQRNVAACAKHYVGDGGTTRGINENNTVATFHDLLGIHMRPYYTAAIRGVSTIMVSYSSWNGVKMHANRFLITDFLKTRLRFRGF VLSDWLGLDRITSPEHADYLLSIKLGILAGIDMVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 663 Download |
| MGVRRRVVVD AAALLILQLC CCCIIALARA AAATMPSATD IVGDVGERQQ QEVGAKYRDP 60 RQPLNARVDD LLRRMTLAEK IGQMSQIDRE NATAGVISKY FIGSVLRGGG RVPAAGAPPE 120 AWVEMVEEIQ RAAVSSTRLG IPVMFGIDAV HGHGYVYKAT VFPHNVGLGC TRDPELARKI 180 GAAVALEVRA TGIPFIFAPC LAVCRDPRWG RCYESFSEHP ELVQNMTSIV SGFQGEIPAT 240 GRLGTPYVAG QRNVAACAKH YVGDGGTTRG INENNTVATF HDLLGIHMRP YYTAAIRGVS 300 TIMVSYSSWN GVKMHANRFL ITDFLKTRLR FRGFVLSDWL GLDRITSPEH ADYLLSIKLG 360 ILAGIDMVMI PYRYTEFIDD LTLLVQNGTI PLSRIDDAVR RILRVKFTMG LFDNPYADTS 420 LVGELGKQEH RDLAREAVRK SLVLLKNGKP GAKPLLPLPK KPSYGRSVLV AGSHGDDLGS 480 QCGGWTITWQ GQTGNNLTAG TTILDGIKRA VVPGTDVVYS ENPDAGFVQQ NKARFDYAIV 540 VVGEPPYAET HGDNLNLTIP APGPDVIRNV CGSIRCVVVL VSGRPLVVEP FIDAMDALVA 600 AWLPGTEGQG VSDVLFGDYG FTGKLSRTWF RSVDQLPMNV GDAHYDPLFP FGFGLETQPS 660 TY* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 6.0e-28 | 124 | 662 | 613 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-33 | 465 | 655 | 208 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 9.0e-71 | 51 | 655 | 697 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 8.0e-71 | 75 | 443 | 384 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-81 | 76 | 405 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF07705.2 | 0 | 56 | 661 | 16 | 620 | Os02g0131400 [Oryza sativa Japonica Group] |
| RefSeq | NP_001045791.1 | 0 | 56 | 661 | 44 | 648 | Os02g0131400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001051275.1 | 0 | 56 | 658 | 26 | 621 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451476.1 | 0 | 1 | 662 | 1 | 662 | hypothetical protein SORBIDRAFT_04g002570 [Sorghum bicolor] |
| RefSeq | XP_002453253.1 | 0 | 56 | 662 | 49 | 658 | hypothetical protein SORBIDRAFT_04g002560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 57 | 660 | 5 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1x38_A | 0 | 57 | 660 | 5 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1lq2_A | 0 | 57 | 660 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 57 | 660 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 57 | 660 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
