| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g003690.1 |
| Family | GH9 |
| Protein Properties | Length: 536 Molecular Weight: 57982.5 Isoelectric Point: 5.186 |
| Chromosome | Chromosome/Scaffold: 4 Start: 3511296 End: 3514963 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 34 | 514 | 0 |
| DYGDALHKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTLLSWGMLEYGGGVADAGELAHALQAIKWGTDYF VKAHTAPTELWAQVGDGDSDHYCWQRPEDMTTSRRAYKVDAEHPGSEVAAETAAAMAAASAVFRAAGDAHYAHLLLHHAQQLFDFADTYRGRYDDSVDVV KSYYPSSSGYQDELLWAALWLHRVTGRRDYLRYALDNAEAFGGTGWAVSEFSWDIKYAGLQVLASQLLVEAKEQRLRLSAEEVAVVEQLRSKAEYYVCSC MNRNPGGAKHNAGRTPAGLLFIRPWNNLQYASGAAFLLTVYSDVLSSLDQPLRCGGSGDDDGEPAAAGDAGEVLAFAKSQADYILGTNPMRTSYLVGYGA AYPRQVHHRAASSASYSHDRDFIGCLQGFDSWYSARRENPNDLVGAVVGGPNGEDVFNDQRGAYMQTEACTYNTAPMVGVF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 536 Download |
| MSDVSVRFVV AVAVAAVAAI SLAAAVSAAS AAHDYGDALH KSLLYFEAQR SGRLPYNQRV 60 RWRGHSGLTD GLEQGVDLVG GYYDAGDHVK FGLPMAFTVT LLSWGMLEYG GGVADAGELA 120 HALQAIKWGT DYFVKAHTAP TELWAQVGDG DSDHYCWQRP EDMTTSRRAY KVDAEHPGSE 180 VAAETAAAMA AASAVFRAAG DAHYAHLLLH HAQQLFDFAD TYRGRYDDSV DVVKSYYPSS 240 SGYQDELLWA ALWLHRVTGR RDYLRYALDN AEAFGGTGWA VSEFSWDIKY AGLQVLASQL 300 LVEAKEQRLR LSAEEVAVVE QLRSKAEYYV CSCMNRNPGG AKHNAGRTPA GLLFIRPWNN 360 LQYASGAAFL LTVYSDVLSS LDQPLRCGGS GDDDGEPAAA GDAGEVLAFA KSQADYILGT 420 NPMRTSYLVG YGAAYPRQVH HRAASSASYS HDRDFIGCLQ GFDSWYSARR ENPNDLVGAV 480 VGGPNGEDVF NDQRGAYMQT EACTYNTAPM VGVFSKLMQL EGQSPRPAPA PAEDL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 1.0e-159 | 34 | 517 | 484 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-165 | 34 | 515 | 484 | + Glycosyl hydrolase family 9. | ||
| PLN02420 | PLN02420 | 0 | 34 | 523 | 490 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 33 | 533 | 508 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 34 | 529 | 501 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001045907.1 | 0 | 34 | 515 | 29 | 507 | Os02g0151300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002321149.1 | 0 | 16 | 524 | 25 | 513 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002453306.1 | 0 | 1 | 535 | 1 | 535 | hypothetical protein SORBIDRAFT_04g003690 [Sorghum bicolor] |
| RefSeq | XP_002454315.1 | 0 | 32 | 531 | 64 | 554 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
| RefSeq | XP_002525326.1 | 0 | 27 | 532 | 38 | 525 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 32 | 520 | 2 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1ksc_A | 0 | 32 | 520 | 2 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1ks8_A | 0 | 32 | 520 | 2 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 32 | 534 | 3 | 457 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 32 | 534 | 3 | 457 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
