| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g005720.1 |
| Family | GT4 |
| Protein Properties | Length: 960 Molecular Weight: 107564 Isoelectric Point: 7.0875 |
| Chromosome | Chromosome/Scaffold: 4 Start: 5618629 End: 5625317 |
| Description | sucrose phosphate synthase 1F |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 459 | 627 | 0 |
| TNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAISKMHNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGA FVNVAYFEQFGVTLIEAAMNGLPIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKLLSDKQLWSR | |||
| Full Sequence |
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| Protein Sequence Length: 960 Download |
| MAGNDNWINS YLDAILDAGK AAIGGDRPSL LLRERGHFSP ARYFVEEVIT GYDETDLYKT 60 WLRANAMRSP QERNTRLENM TWRIWNLARK KKEFEKEEAC RLSKRQPETE KTRADATADM 120 SEDLFEGEKG EDAGDPSVAY GDSTTGSSPK TSSIDKLYIV LISLHGLVRG ENMELGRDSD 180 TGGQVKYVVE LAKALSSSPG VYRVDLLTRQ ILAPNFDRSY GEPAELLVST SGKNSKQEKG 240 ENSGAYIIRL PFGPKDKYLA KEHLWPFIQE FVDGALSHIV RMSKAIGEET GRVHPVWPAV 300 IHGHYASAGI AAALLSGALN LPMAFTGHFL GKDKLEGLLK QGRQTREQIN MTYKIMCRIE 360 AEELSLDASE IVIASTRQEI EEQWNLYDGF EVILARKLRA RVKRGANCYG RFMPRMVIIP 420 PGVEFGHIIH DFDMDGEEEN PSPASEDPPI WSQIMRFFTN PRKPMILAVA RPYPEKNITT 480 LVKAFGECRP LRELANLTLI MGNREAISKM HNMSAAVLTS VLTLIDEYDL YGQVAYPKHH 540 KHSEVPDIYR LAARTKGAFV NVAYFEQFGV TLIEAAMNGL PIIATKNGAP VEINQVLNNG 600 LLVDPHDQNA IADALYKLLS DKQLWSRCRE NGLTNIHRFS WPEHCKNYLS RILTLGPRSP 660 AIGNREERSN TPISGRRQII VISVDSVNKE DLVRIIRNAI EVIHTQNMSS STGFVLSTSL 720 TISEINSLLL SGGMLPTDFD AFICNSGSNI YYPSYSGETP NNSKITFALD QNHQSHIEYR 780 WGGEGLRKYL VKWATSVVER KGRTERQIIF EDPEHSSAYC LAFRVVNPNH ELRKLMRIQS 840 LRCNALYNHS ATRLSVVPIH ASRSQALRYL CIRWGIEVPN VAVLVGESGD SDYEELLGGL 900 HRTIILKGEF NIPANRIHTV RRYPLQDVVA LDSSNIIGVE GYTTDDLKSA LQQMGILTQ* 960 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02470 | sucr_synth | 4.0e-43 | 159 | 656 | 544 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03800 | GT1_Sucrose_synthase | 1.0e-122 | 158 | 650 | 494 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02468 | sucrsPsyn_pln | 2.0e-133 | 668 | 955 | 295 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| TIGR02472 | sucr_P_syn_N | 6.0e-155 | 157 | 652 | 498 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 1 | 660 | 679 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABX80099.1 | 0 | 1 | 959 | 1 | 964 | sucrose phosphate synthase III [Saccharum officinarum] |
| GenBank | ABX80100.1 | 0 | 1 | 959 | 1 | 964 | sucrose phosphate synthase III [Saccharum officinarum] |
| DDBJ | BAA19242.1 | 0 | 1 | 959 | 1 | 963 | sucrose-phosphate synthase [Saccharum officinarum] |
| RefSeq | NP_001046108.1 | 0 | 1 | 959 | 1 | 963 | Os02g0184400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451675.1 | 0 | 1 | 959 | 1 | 959 | hypothetical protein SORBIDRAFT_04g005720 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 0 | 180 | 658 | 31 | 462 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 2r66_A | 0 | 180 | 658 | 31 | 462 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 2r60_A | 0 | 180 | 658 | 31 | 462 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 8e-37 | 159 | 655 | 281 | 765 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 8e-37 | 159 | 655 | 281 | 765 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT033968 | 340 | 467 | 806 | 0 |
| GT043340 | 330 | 518 | 842 | 0 |
| GO868168 | 332 | 574 | 900 | 0 |
| GO845360 | 315 | 489 | 803 | 0 |
| GO868219 | 330 | 574 | 898 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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