| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g006520.1 |
| Family | GH127 |
| Protein Properties | Length: 889 Molecular Weight: 97589.2 Isoelectric Point: 6.6287 |
| Chromosome | Chromosome/Scaffold: 4 Start: 6555872 End: 6560379 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH127 | 377 | 662 | 2.5e-23 |
| GAQMRYEVTGDPLYKQIASFFMDTINSSHSYATGGTSAGEFWTDPKHLAGTLSTENEESCTTYNMLKISRNLFRWTKEIAYADYYERALINGVLSIQRGT DPGVMIYMLPQAPGHSKAVSYHSWGTKYDSFWCCYGTGIESFSKLGDSIYFEEKEDLPALNIIQYIPSTYDWKAAGLIVTQKVNTLSSSDQYLQISLSIS AKTKGQTAKLNVRIPSWTFADGAGATLNDKDLGSISPGSFLSITKQWNSDDHLALRFPIRLRTEAIKDDRPEYASLQAVLFGPFVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 889 Download |
| MARAPSVPAA TAVGIVVLLT AAAAAAFRGA EGKSCTNAFP GLTSSHTERA AAQLQRGPPA 60 TALQPVVHRH GHDHDHGHEQ HLTPTDESTW MSLMPRRALR REEAFDWLML YRKLRGATAG 120 GAPRRPGVAA GTFLSDASLH DVRLEPGSLY WRAQQTNLEY LLLLDVDRLV WSFRKQAGLT 180 APGTPYGGWE GPDVELRGHF VGHYLSATAK MWASTHNDTL NAKMSSVIDA LSDCQKKMGT 240 GYLSAFPTEF FDRVEAIKPV WAPYYTIHKI MQGLLDQYTV AGNSKALDMV VNMANYFSDR 300 VKNVIQKYSI ERHWESLNEE TGGMNDVLYQ LYTITNDLKH LTLAHLFDKP CFLGLLAVQA 360 DSISGFHSNT HIPVVIGAQM RYEVTGDPLY KQIASFFMDT INSSHSYATG GTSAGEFWTD 420 PKHLAGTLST ENEESCTTYN MLKISRNLFR WTKEIAYADY YERALINGVL SIQRGTDPGV 480 MIYMLPQAPG HSKAVSYHSW GTKYDSFWCC YGTGIESFSK LGDSIYFEEK EDLPALNIIQ 540 YIPSTYDWKA AGLIVTQKVN TLSSSDQYLQ ISLSISAKTK GQTAKLNVRI PSWTFADGAG 600 ATLNDKDLGS ISPGSFLSIT KQWNSDDHLA LRFPIRLRTE AIKDDRPEYA SLQAVLFGPF 660 VLAGLSTGDW DAKAGNGSAI SDWITAVPPA HNSQLVTFSQ VSNGKTFVLS SANGTLTMQE 720 RPEVDGTDTA IHATFRAHPQ DSTELHDIYR TIAKGASILI EPFDLPGTVI TNNLTLSAQK 780 STDCLFNLVP GLDGNPNSVS LELGTRPGCF LVTGTNYSAG TKIQVSCKSS LESIGGILEQ 840 AASFSQTDPL RQYHPISFVA KGMTRNFLLE PLYSLRDEFY TVYFNIGA* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 2.0e-65 | 139 | 664 | 532 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 3.0e-158 | 141 | 663 | 531 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL52954.1 | 0 | 28 | 886 | 26 | 877 | unknown [Zea mays] |
| GenBank | EAY84862.1 | 0 | 33 | 888 | 26 | 891 | hypothetical protein OsI_06226 [Oryza sativa Indica Group] |
| RefSeq | NP_001046185.1 | 0 | 33 | 888 | 26 | 891 | Os02g0195500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145969.1 | 0 | 28 | 886 | 26 | 877 | hypothetical protein LOC100279496 [Zea mays] |
| RefSeq | XP_002451716.1 | 0 | 1 | 888 | 1 | 888 | hypothetical protein SORBIDRAFT_04g006520 [Sorghum bicolor] |
