Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb04g006850.1 |
Family | GH17 |
Protein Properties | Length: 404 Molecular Weight: 44139.9 Isoelectric Point: 8.5264 |
Chromosome | Chromosome/Scaffold: 4 Start: 6880509 End: 6882435 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 142 | 352 | 0 |
LAEALVGAVLNVHDALRMLRLDAKIELSTPHSEAVFANSYPPSACVFKDDLMVYLRPLLDFFSKTGAPFYVNAYPFLAYMSDPSHIDINYALFKPNAGIV DPKTGLHYDNMFDAQLDAAYFALEAAGYSGMEVRVAETGWASAGDATEAGANMENAVTYDRNLRKRLFLRKGTPYRPDRVAKAYIFALFNEDLKPGPTSE RHYGLFKPDGS |
Full Sequence |
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Protein Sequence Length: 404 Download |
MAPPRWKSGD GRRRRLLLLL CCCLLAFPCH AQQITNTNTN ISHRSDQGGI HSFVGTYGIN 60 YGRIADNLPP PEVVARLLKL AKIRNVKIYD AEHKVLDAFR GTGLNLVVAI PNEFLKDMAA 120 NPAKIPGGFA FMPDLGGADT GLAEALVGAV LNVHDALRML RLDAKIELST PHSEAVFANS 180 YPPSACVFKD DLMVYLRPLL DFFSKTGAPF YVNAYPFLAY MSDPSHIDIN YALFKPNAGI 240 VDPKTGLHYD NMFDAQLDAA YFALEAAGYS GMEVRVAETG WASAGDATEA GANMENAVTY 300 DRNLRKRLFL RKGTPYRPDR VAKAYIFALF NEDLKPGPTS ERHYGLFKPD GSVSINIGLK 360 GLLPSSAPPH PLLPFKRVGA WGWIVQYSAA LLPCTLFFLA LGT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-79 | 58 | 352 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN32059.1 | 0 | 1 | 401 | 1 | 415 | unknown [Zea mays] |
DDBJ | BAD15845.1 | 0 | 44 | 401 | 46 | 423 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC72694.1 | 0 | 44 | 401 | 46 | 423 | hypothetical protein OsI_06270 [Oryza sativa Indica Group] |
GenBank | EEE56513.1 | 0 | 44 | 401 | 46 | 423 | hypothetical protein OsJ_05789 [Oryza sativa Japonica Group] |
RefSeq | XP_002453496.1 | 0 | 1 | 403 | 1 | 403 | hypothetical protein SORBIDRAFT_04g006850 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 58 | 359 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_C | 0 | 58 | 359 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_B | 0 | 58 | 359 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_A | 0 | 58 | 359 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3em5_D | 0 | 58 | 359 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |