| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g007660.1 |
| Family | GH35 |
| Protein Properties | Length: 741 Molecular Weight: 81773.8 Isoelectric Point: 9.1388 |
| Chromosome | Chromosome/Scaffold: 4 Start: 8017925 End: 8021966 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 52 | 355 | 0 |
| LVINGRRRILISGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYHFADRYDLVRFVKLVRQAGLYVHLRIGPYVCAEWNFGGFPVWLK YVPGIRFRTDNGPFKAAMQKFVEKIVSMMKSEGLFEWQGGPIIMAQVENEFGPMESVVGSGAKPYAHWAAQMAVGTNTGVPWVMCKQDDAPDPVINTCNG FYCDYFTPNRKYKPTMWTEAWTGWFTKFGGALPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEFGLLRQPKWGHLR DLHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 741 Download |
| MAAARRLLAA CSSGGGAGAG AGSRILLAVF FLAASLLASA ANAAVSYDHR SLVINGRRRI 60 LISGSIHYPR STPEMWPGLI QKAKDGGLDV IQTYVFWNGH EPVQGQYHFA DRYDLVRFVK 120 LVRQAGLYVH LRIGPYVCAE WNFGGFPVWL KYVPGIRFRT DNGPFKAAMQ KFVEKIVSMM 180 KSEGLFEWQG GPIIMAQVEN EFGPMESVVG SGAKPYAHWA AQMAVGTNTG VPWVMCKQDD 240 APDPVINTCN GFYCDYFTPN RKYKPTMWTE AWTGWFTKFG GALPHRPVED LAFAVARFIQ 300 KGGSFVNYYM YHGGTNFGRT AGGPFIATSY DYDAPIDEFG LLRQPKWGHL RDLHRAIKQA 360 EPALISGDPT IQSIGNYEKA YIFKSKNGAC AAFLSNYHMK TAVKIRFDGR HYDLPAWSIS 420 ILPDCKTAVF NTATVKEPTL LPKMNPVLHF AWQSYSEDTN SLDDSAFTRN GLVEQLSLTW 480 DKSDYLWYTT HVSIGGNEQF LKSGQWPQLT VYSAGHSMQV FVNGRSYGSV YGGYDNPKLT 540 FNGHVKMWQG SNKISILSSA VGLPNNGNHF ELWNVGVLGP VTLSGLNEGK RDLSHQKWTY 600 QVGLKGESLG LHTVTGSSAV EWAGPGGKQP LTWHKALFNA PAGSDPVALD MGSMGKGQIW 660 VNGHHAGRYW SYRAYSGSCR RCSYAGTYRE DQCLSNCGDI SQRWYHVPRS WLKPSGNLLV 720 VLEEYGGGDL AGVTLATRTT * 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.003 | 67 | 203 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-21 | 46 | 347 | 351 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-159 | 51 | 357 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 46 | 740 | 700 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2X2H7 | 0 | 42 | 740 | 35 | 729 | BGAL4_ORYSI RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
| GenBank | EAZ22260.1 | 0 | 42 | 726 | 35 | 716 | hypothetical protein OsJ_05915 [Oryza sativa Japonica Group] |
| RefSeq | NP_001130532.1 | 0 | 42 | 739 | 25 | 721 | hypothetical protein LOC100191631 [Zea mays] |
| Swiss-Prot | Q6Z6K4 | 0 | 42 | 740 | 35 | 729 | BGAL4_ORYSJ RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
| RefSeq | XP_002453540.1 | 0 | 45 | 740 | 45 | 740 | hypothetical protein SORBIDRAFT_04g007660 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 39 | 385 | 2 | 362 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.006 | 486 | 726 | 385 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 6.00036e-42 | 45 | 438 | 11 | 412 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 6.00036e-42 | 45 | 438 | 11 | 412 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
