| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g019270.1 |
| Family | AA2 |
| Protein Properties | Length: 392 Molecular Weight: 41681.4 Isoelectric Point: 5.0241 |
| Chromosome | Chromosome/Scaffold: 4 Start: 45055530 End: 45056813 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 96 | 369 | 0 |
| YHSDPNVAAALVRLFFHDCFIHGCDASVLLDVVDGGRKSERDAGPNQSLRGMSAIEEIKRRVEAACPRTVSCADILALAARDSVVLVGGPTYPVLTGRRD SAQSFYHDAAAGGIPSPNATYGMTLAAFARHGREFTERETVALLGAHSIGKVRCRFFADRIWNFAGTGAPDDSIDPDMVGEMRAVCGGSGGDDGDGDDDG AAAMEMGYYRQGREVGFGAHYYARLLEGRGILRADQQLTAGSTVRWVRVYASGARGEEVFREDFAHAMVKLSGL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 392 Download |
| MSSLGTPARR AICLLAAVSI VLSTVSLRCD ASRSSADFSP DDDDYGHDEN GGNSSSSSFS 60 FTFQPETSSP GLVFGFYDET CPDAEDIISS TMRKLYHSDP NVAAALVRLF FHDCFIHGCD 120 ASVLLDVVDG GRKSERDAGP NQSLRGMSAI EEIKRRVEAA CPRTVSCADI LALAARDSVV 180 LVGGPTYPVL TGRRDSAQSF YHDAAAGGIP SPNATYGMTL AAFARHGREF TERETVALLG 240 AHSIGKVRCR FFADRIWNFA GTGAPDDSID PDMVGEMRAV CGGSGGDDGD GDDDGAAAME 300 MGYYRQGREV GFGAHYYARL LEGRGILRAD QQLTAGSTVR WVRVYASGAR GEEVFREDFA 360 HAMVKLSGLA PLTGSAGQIR ISCSKPVVHD N* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 8.0e-17 | 86 | 367 | 306 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 4.0e-55 | 88 | 244 | 158 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-71 | 71 | 384 | 317 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 4.0e-130 | 71 | 385 | 317 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF85842.1 | 0 | 87 | 387 | 1 | 290 | unknown [Zea mays] |
| GenBank | ACF88167.1 | 0 | 1 | 387 | 1 | 378 | unknown [Zea mays] |
| EMBL | CAH69260.1 | 0 | 15 | 387 | 12 | 365 | TPA: class III peroxidase 18 precursor [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC71376.1 | 0 | 15 | 378 | 12 | 356 | hypothetical protein OsI_03489 [Oryza sativa Indica Group] |
| RefSeq | XP_002453827.1 | 0 | 1 | 391 | 1 | 391 | hypothetical protein SORBIDRAFT_04g019270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 76 | 385 | 7 | 302 | A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase |
| PDB | 1pa2_A | 0 | 76 | 385 | 7 | 302 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1gw2_A | 0 | 76 | 391 | 6 | 307 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
| PDB | 1w4y_A | 0 | 76 | 390 | 6 | 312 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
| PDB | 1w4w_A | 0 | 76 | 390 | 6 | 312 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
