| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g019560.1 |
| Family | GT41 |
| Protein Properties | Length: 1012 Molecular Weight: 113201 Isoelectric Point: 6.6522 |
| Chromosome | Chromosome/Scaffold: 4 Start: 45712063 End: 45726436 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT41 | 619 | 779 | 0 |
| AEGKHCRLRVGYVSSDFGNHPLSHLMGSVFGMHDRANIEVFCYALSQNDGTEWRQRIQSEAEHFVDVSAMTSDNIARLINQDKIQILINLNGYTKGARNE IFALQPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSPSRYSHIYSEKLVHLPHCYFVNDYKQ | |||
| GT41 | 790 | 998 | 0 |
| PHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGETRVRAHAVARGVRSDQIIFTDVAMKNEHIRRSALADLFLDTPLCN AHTTGTDILWAGLPMITLPLEKMATRVAGSLCVATGLGEEMIVSSMKEYEDRAVDLALNPVKLQALTNKLKEVRMTCPLFDTARWVRNLERAYYKMWNLY CSSRHPEPF | |||
| Full Sequence |
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| Protein Sequence Length: 1012 Download |
| MLSLQQQHGG AVAGGGGGDA RNHAPQPAVL GAGVDWLAFG ARADLEEPAR NAPSPALFLL 60 PPAPLDDRAA QPEPKPKPGQ LAGAVDEERH LALAHQNYRS GKYREALEHG NVVYEKNARR 120 TDNLLLLGAI YYQIRNYDMC IAKNEEALAI DPQFAECYGN MANAWKEKGD IDLAIRYYLT 180 AIQLRPNFCD AWSNLASAYT RKGRLNEAAQ CCRQALAINP RLVDAHSNLG NLMKAQGFIQ 240 EAYSCYIEAL RIDPHFAIAW SNLAGLFMEA GDLDKALMYY KEAVKLKPSF ADAYLNQGNV 300 YKALGMPQDA IMCYQRALQA RPDYAMAYGN LATIYYEQGQ LDMAIRCYNQ AIVYDPQFVE 360 AYNNMGNALK DAGRVEEAIN CYRSCLALQA NHPQALTNLG NIYMEWSMIS AAASFYKAAI 420 SVTSGLSSPL NNLAVIYKQQ GNYADAITCY TEVLRIDPTA ADALVNRGNT FKEIGRVNEA 480 IQDYVQAATI RPNMAEAHAN LASAYKDSGH VETAIVSYKQ ALRLRPDFPE ATCNLLHTLQ 540 CVCDWENRDA MFRDVEEIIR RQIKMSVLPS VQPFHAIAYP IDPMLALEIS CKYAAHCSLI 600 ASRFGLPPFV HPSPVPVKAE GKHCRLRVGY VSSDFGNHPL SHLMGSVFGM HDRANIEVFC 660 YALSQNDGTE WRQRIQSEAE HFVDVSAMTS DNIARLINQD KIQILINLNG YTKGARNEIF 720 ALQPAPIQVS YMGFPGTTGA AYIDYLVTDE FVSPSRYSHI YSEKLVHLPH CYFVNDYKQK 780 NRDCLTPVCP HKRSDYGLPE DKFIFACFNQ LYKMDPEIFD TWCNILKRVP NSALWLLRFP 840 AAGETRVRAH AVARGVRSDQ IIFTDVAMKN EHIRRSALAD LFLDTPLCNA HTTGTDILWA 900 GLPMITLPLE KMATRVAGSL CVATGLGEEM IVSSMKEYED RAVDLALNPV KLQALTNKLK 960 EVRMTCPLFD TARWVRNLER AYYKMWNLYC SSRHPEPFKV LEDDNEFPFD R* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13844 | Glyco_transf_41 | 6.0e-70 | 793 | 986 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 2.0e-71 | 626 | 779 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 1.0e-99 | 431 | 989 | 568 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0042802 | identical protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26645.1 | 0 | 1 | 1011 | 1 | 1009 | unknown [Zea mays] |
| DDBJ | BAD21873.1 | 0 | 1 | 1011 | 1 | 953 | putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] |
| GenBank | EEC73199.1 | 0 | 1 | 1011 | 1 | 1004 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEE57013.1 | 0 | 1 | 1011 | 1 | 1004 | hypothetical protein OsJ_06783 [Oryza sativa Japonica Group] |
| RefSeq | XP_002453843.1 | 0 | 1 | 1011 | 1 | 1011 | hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 392 | 777 | 8 | 390 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 4gz6_D | 0 | 793 | 996 | 514 | 716 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 4gz6_D | 5e-30 | 220 | 462 | 6 | 246 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 4gz6_D | 3e-28 | 152 | 296 | 6 | 150 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| PDB | 4gz6_D | 4e-25 | 186 | 332 | 6 | 152 | A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795247 | 461 | 552 | 1012 | 0 |
| HO778725 | 450 | 563 | 1012 | 0 |
| HO798232 | 419 | 76 | 494 | 0 |
| HO798232 | 367 | 160 | 526 | 0 |
| HO795247 | 54 | 500 | 553 | 8e-17 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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