| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g020140.1 |
| Family | GT8 |
| Protein Properties | Length: 535 Molecular Weight: 59625.3 Isoelectric Point: 9.8772 |
| Chromosome | Chromosome/Scaffold: 4 Start: 47323712 End: 47326849 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 191 | 505 | 0 |
| CLAVRLTAERIARPDHYADPVPPPRALEDPALFHYAIFSDNVLAASCVVRSAVANSNDPSKHVFHVVTDRMNLGAMQVIIRRMDLKGAHYEVKAFEDYKF LNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSF HRYAQYMNFSHPLIKAKFNPNACGWAYGMNFFDLDSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNPSISMEEIRN AAVVHFNGNMKPWLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 535 Download |
| MVAGAGNPGR PVAVLALLLF LLAAAAAPAA SGAGSAAVNG DRLRAEQIRK QASDAAASAA 60 ALAAASRRLH LDRARHLRLL SSLHRNLTNT LRALSIAADS ASASDASSGS GSDSASANVS 120 SSRLLDLQAK DLIRAARAAI ADSKPLFDPQ LKIQRLKDTI FAQNELLARA KKRGAFASLI 180 AAKSIPKPLH CLAVRLTAER IARPDHYADP VPPPRALEDP ALFHYAIFSD NVLAASCVVR 240 SAVANSNDPS KHVFHVVTDR MNLGAMQVII RRMDLKGAHY EVKAFEDYKF LNSSYVPVLR 300 QLESANLQKF YFENKLENAT KDASNMKFRN PKYLSMLNHL RFYLPEMYPK LHRILFLDDD 360 VVVQRDLTGL WKIDMDGKVN GAVETCFGSF HRYAQYMNFS HPLIKAKFNP NACGWAYGMN 420 FFDLDSWRRE KCTEQYHYWQ NQNENRTLWK LGTLPPGLIT FYSTTKPLEK SWHVLGLGYN 480 PSISMEEIRN AAVVHFNGNM KPWLDIGMNQ FRHLWTKYVD YDDSYIRQCN FAPP* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 1.0e-121 | 223 | 520 | 300 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02910 | PLN02910 | 2.0e-169 | 171 | 530 | 361 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 2.0e-175 | 153 | 533 | 381 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 3.0e-176 | 147 | 531 | 388 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 123 | 533 | 412 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD23465.1 | 0 | 39 | 534 | 42 | 533 | putative glycosyl transferase [Oryza sativa Japonica Group] |
| GenBank | EEC73220.1 | 0 | 39 | 534 | 42 | 533 | hypothetical protein OsI_07307 [Oryza sativa Indica Group] |
| RefSeq | NP_001046899.1 | 0 | 39 | 534 | 72 | 563 | Os02g0498700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002301803.1 | 0 | 44 | 532 | 74 | 553 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002453869.1 | 0 | 1 | 534 | 1 | 534 | hypothetical protein SORBIDRAFT_04g020140 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
