| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g021700.1 |
| Family | GH17 |
| Protein Properties | Length: 410 Molecular Weight: 43698.3 Isoelectric Point: 7.8951 |
| Chromosome | Chromosome/Scaffold: 4 Start: 50829916 End: 50832506 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 51 | 369 | 0 |
| IGVNYGQIANNLPSPARVSWLLRSMRISKVKLYDADPNVLRAFLGTGVEFVVGIGNEYVPAMVSPAAAQAWLQQHVVPHLRAGARITCVTVGNEVFKGND TALQSAVLPAMQSVHRALGALGLQGRVNVTTAHSLDIMGVSFPPSAGAFHPAAMAHLQPFLSFLSATRAPFLINCYPYFAYKDDPARVPLDYVLFRPNAA GVVDERTGLRYDNMLYAQVDAVYAAIQGLGHTDVEVKVSETGWPSRGDADEPGATPEYAGTYIRNLLQRIEMKQGTPLRPATPVDVYVFALFNENLKPGP ASERNYGLFYPDGTPVYNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 410 Download |
| MATAGRPSRT ALSPPPAPSC NLAAACCFVL LVVPILLADQ QVAVVAESLS IGVNYGQIAN 60 NLPSPARVSW LLRSMRISKV KLYDADPNVL RAFLGTGVEF VVGIGNEYVP AMVSPAAAQA 120 WLQQHVVPHL RAGARITCVT VGNEVFKGND TALQSAVLPA MQSVHRALGA LGLQGRVNVT 180 TAHSLDIMGV SFPPSAGAFH PAAMAHLQPF LSFLSATRAP FLINCYPYFA YKDDPARVPL 240 DYVLFRPNAA GVVDERTGLR YDNMLYAQVD AVYAAIQGLG HTDVEVKVSE TGWPSRGDAD 300 EPGATPEYAG TYIRNLLQRI EMKQGTPLRP ATPVDVYVFA LFNENLKPGP ASERNYGLFY 360 PDGTPVYNVG LNGYLPPTML VSSSSTAAAR QVIRLFALVA IASVAFVLS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 78 | 362 | 295 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-99 | 51 | 369 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH67163.1 | 0 | 15 | 409 | 12 | 393 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY86149.1 | 0 | 45 | 409 | 33 | 391 | hypothetical protein OsI_07522 [Oryza sativa Indica Group] |
| RefSeq | NP_001047027.1 | 0 | 45 | 409 | 33 | 391 | Os02g0532900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001052739.1 | 0 | 15 | 409 | 12 | 393 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002452203.1 | 0 | 1 | 409 | 1 | 409 | hypothetical protein SORBIDRAFT_04g021700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 51 | 371 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 50 | 371 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 50 | 371 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 50 | 371 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 50 | 371 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
