| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g022560.1 |
| Family | AA2 |
| Protein Properties | Length: 452 Molecular Weight: 48965.1 Isoelectric Point: 4.9951 |
| Chromosome | Chromosome/Scaffold: 4 Start: 52116386 End: 52120419 |
| Description | thylakoidal ascorbate peroxidase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 79 | 339 | 0 |
| AQEDIKELLKTTYCHPILVRLGWHDSGTYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEEAGGPKIP MKYGRVDVTAAEQCPPEGRLPDAGPRDPAEHLREVFYRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDM KFLSQLPSEEQKEQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 452 Download |
| MAERLAASLL PAASPSPSAR RATVAAAAAA SFPSPCSARA GLRLRSRQPL LSQKAAGRGR 60 GVRVVRCMAA SDAAQLKAAQ EDIKELLKTT YCHPILVRLG WHDSGTYDKN IEEWPQRGGA 120 DGSLRFDAEL SHGANAGLIN ALKLIQPIKD KYPGITYADL FQLASATAIE EAGGPKIPMK 180 YGRVDVTAAE QCPPEGRLPD AGPRDPAEHL REVFYRMGLD DKEIVALSGA HTLGRSRPDR 240 SGWGKPETKY TKDGPGEPGG QSWTVEWLKF DNSYFKDMKF LSQLPSEEQK EQDLLVLPTD 300 AALFEDPSFK VYAEKYAEDQ EAFFKDYAEA HAKLSDLGSK FDPPEGFSLD DDMSTAPADE 360 KTEEPTPEPV AAAITTATAD DNNGAAPQPE PFVAAKYSYG KRELSESMKQ KIRAEYEGFG 420 GSPDKPMQSN YFLNIMILIA GLAFLTSLVG N* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 6.0e-49 | 80 | 319 | 248 | + Peroxidase. | ||
| PLN02879 | PLN02879 | 7.0e-62 | 80 | 338 | 259 | + L-ascorbate peroxidase | ||
| PLN02364 | PLN02364 | 1.0e-63 | 80 | 338 | 260 | + L-ascorbate peroxidase 1 | ||
| PLN02608 | PLN02608 | 4.0e-92 | 82 | 344 | 263 | + L-ascorbate peroxidase | ||
| cd00691 | ascorbate_peroxidase | 1.0e-138 | 80 | 342 | 263 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS80158.1 | 0 | 1 | 451 | 1 | 443 | thylakoid ascorbate peroxidase [Triticum aestivum] |
| GenBank | ACF88425.1 | 0 | 1 | 451 | 1 | 451 | unknown [Zea mays] |
| RefSeq | NP_001047111.1 | 0 | 1 | 451 | 1 | 478 | Os02g0553200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149509.1 | 0 | 1 | 451 | 1 | 462 | thylakoid-bound ascorbate peroxidase APx8 [Zea mays] |
| RefSeq | XP_002453976.1 | 0 | 1 | 451 | 1 | 451 | hypothetical protein SORBIDRAFT_04g022560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iyn_A | 0 | 69 | 401 | 1 | 294 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xj6_A | 0 | 76 | 338 | 15 | 245 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xih_A | 0 | 76 | 338 | 15 | 245 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xif_A | 0 | 76 | 338 | 15 | 245 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 2xi6_A | 0 | 76 | 338 | 15 | 245 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
