Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb04g023520.1 |
Family | CE10 |
Protein Properties | Length: 342 Molecular Weight: 35635.8 Isoelectric Point: 5.7381 |
Chromosome | Chromosome/Scaffold: 4 Start: 53202092 End: 53203233 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 54 | 339 | 0 |
AATGVQSKDVHLGSYSARLYLPPVAASSAKLPVVVYVHGGGFVAESAASPGYHLFLNRLAAACPALVVSVDYRLAPEHPLPAGYDDCLAALKWVLSAADP WVAAHGDLARVFVAGDSAGGNVCHYLAIHPDVVVVAGPQPRPLKGAVLIHPWFWGSEAVGEETTDPAARAMGAGLWFFACPDTSGMDDPRMNPMAPAAPG LHTLACDRVLVCAAEGDFLRWRGRAYAEAVAAARGGGGGGLGDANANAGGGVELLETMGEGHVFYLFKPDCDKAKEMMDKMVAFIN |
Full Sequence |
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Protein Sequence Length: 342 Download |
MASSKPSLSL PFPIPAPDPS DEVVREFGPL LRIYKSGRIE RPLVAPPVDP GHDAATGVQS 60 KDVHLGSYSA RLYLPPVAAS SAKLPVVVYV HGGGFVAESA ASPGYHLFLN RLAAACPALV 120 VSVDYRLAPE HPLPAGYDDC LAALKWVLSA ADPWVAAHGD LARVFVAGDS AGGNVCHYLA 180 IHPDVVVVAG PQPRPLKGAV LIHPWFWGSE AVGEETTDPA ARAMGAGLWF FACPDTSGMD 240 DPRMNPMAPA APGLHTLACD RVLVCAAEGD FLRWRGRAYA EAVAAARGGG GGGLGDANAN 300 AGGGVELLET MGEGHVFYLF KPDCDKAKEM MDKMVAFINA P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 3.0e-9 | 83 | 173 | 104 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 1.0e-12 | 72 | 184 | 131 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 6.0e-14 | 72 | 184 | 126 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 1.0e-26 | 24 | 273 | 260 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-40 | 87 | 273 | 192 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY86351.1 | 0 | 16 | 339 | 6 | 316 | hypothetical protein OsI_07729 [Oryza sativa Indica Group] |
RefSeq | NP_001047179.1 | 0 | 16 | 339 | 6 | 313 | Os02g0567800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148459.1 | 0 | 1 | 341 | 1 | 334 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001150025.1 | 0 | 1 | 341 | 1 | 332 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002452312.1 | 0 | 1 | 341 | 1 | 341 | hypothetical protein SORBIDRAFT_04g023520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 5e-34 | 16 | 283 | 11 | 289 | A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate Kinase |
PDB | 2o7r_A | 5e-34 | 16 | 283 | 11 | 289 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 1e-29 | 84 | 340 | 113 | 350 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 1e-29 | 84 | 340 | 113 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 1e-26 | 84 | 340 | 112 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE016167 | 263 | 15 | 274 | 0 |
EE015724 | 255 | 23 | 274 | 0 |
CD439469 | 252 | 10 | 258 | 0 |
EE162211 | 239 | 37 | 274 | 0 |
EE162210 | 239 | 37 | 274 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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