| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g026390.1 |
| Family | AA3 |
| Protein Properties | Length: 777 Molecular Weight: 83101.6 Isoelectric Point: 7.9083 |
| Chromosome | Chromosome/Scaffold: 4 Start: 56168548 End: 56171694 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 262 | 769 | 1.26117e-44 |
| ECDVVIIGSGCGGGVAAAVLAGAGHKAVVIEKGNYFTSSDYTAVEAPSMEHLYEGGGFVSTLSGSALLLAGSTVGGGTAVNWSACIKTPDDVREEWARNQ GLPLFATDEYAAAMDKVFERLGVTAGCAEEGLQNKVLRKGCEKLGYKVESVSRNSSEGHYCGSCGYGCRTGDKRGTDRTWLVDAVTRGAVILTGCKAEKL LLERMVTGGRADGRAKRCVGVVARSTNPAITRTLEVRARATVSACGSLLTPVLLRGSGLSNRHIGKNLHLHPTALVWGYFPDTMPDLKGKTYEGGIITSL HKVEGAPGAPARAILETPAMGLAGAGTQFPWVSGSDMKERILRYGRTVHLFSMVRDRGSGTVHGERRVAYHLDATDRENMREGLRRALRVLAAAGAAEIG THRSDGQRFVCRGATEAALEEFLDGVDVVRGPQSKAEAWSLCCTAHQMGSCRMGATARDGAVDARGESWEVESLYVCDGSVLPSAVGVNPMVTIQSVAYC LATGIAES | |||
| Full Sequence |
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| Protein Sequence Length: 777 Download |
| MGAGNKRGHP LLRGVGARSE KYTHGFSASQ MAALTALCGA LVPSLPPDRR NGHHHHHHPQ 60 EDDGGRGGGD GDGNSSKVVE EFLLASAADP PVPGEVAELM SRKCLPEALA LVRTVLWLLG 120 TRPGSLALCG ARPCLSWRLP FVRRFDELPL EQREAALRRW SRQTLLPPLR MFFVIVKVFC 180 LYVFYSWTDE NLKNPHWRAI GYSPPLADDE PTPAESERPE KRPLDDGIVE TTKETDASLP 240 ALLAEKGLAV ADDAARNVWR VECDVVIIGS GCGGGVAAAV LAGAGHKAVV IEKGNYFTSS 300 DYTAVEAPSM EHLYEGGGFV STLSGSALLL AGSTVGGGTA VNWSACIKTP DDVREEWARN 360 QGLPLFATDE YAAAMDKVFE RLGVTAGCAE EGLQNKVLRK GCEKLGYKVE SVSRNSSEGH 420 YCGSCGYGCR TGDKRGTDRT WLVDAVTRGA VILTGCKAEK LLLERMVTGG RADGRAKRCV 480 GVVARSTNPA ITRTLEVRAR ATVSACGSLL TPVLLRGSGL SNRHIGKNLH LHPTALVWGY 540 FPDTMPDLKG KTYEGGIITS LHKVEGAPGA PARAILETPA MGLAGAGTQF PWVSGSDMKE 600 RILRYGRTVH LFSMVRDRGS GTVHGERRVA YHLDATDREN MREGLRRALR VLAAAGAAEI 660 GTHRSDGQRF VCRGATEAAL EEFLDGVDVV RGPQSKAEAW SLCCTAHQMG SCRMGATARD 720 GAVDARGESW EVESLYVCDG SVLPSAVGVN PMVTIQSVAY CLATGIAESL RRGKIQ* 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.004 | 707 | 759 | 54 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 2.0e-17 | 705 | 762 | 58 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-18 | 395 | 768 | 392 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-71 | 310 | 534 | 228 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27562.1 | 0 | 1 | 776 | 1 | 765 | unknown [Zea mays] |
| GenBank | EEC73620.1 | 0 | 6 | 770 | 11 | 765 | hypothetical protein OsI_08118 [Oryza sativa Indica Group] |
| RefSeq | NP_001148058.1 | 0 | 1 | 776 | 1 | 765 | oxidoreductase [Zea mays] |
| RefSeq | XP_002454188.1 | 0 | 1 | 775 | 1 | 768 | hypothetical protein SORBIDRAFT_04g026370 [Sorghum bicolor] |
| RefSeq | XP_002454190.1 | 0 | 1 | 776 | 1 | 776 | hypothetical protein SORBIDRAFT_04g026390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b8s_A | 0.00004 | 692 | 759 | 429 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 2gew_A | 0.00004 | 692 | 759 | 429 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4w_A | 0.00004 | 692 | 759 | 429 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4v_A | 0.00004 | 692 | 759 | 429 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4u_A | 0.00004 | 692 | 759 | 429 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 762 | 9 | 770 | 0 |
| HO779224 | 451 | 233 | 683 | 0 |
| CB676542 | 241 | 342 | 581 | 0 |
| EE172872 | 259 | 1 | 257 | 0 |
| EE016105 | 234 | 307 | 540 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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