| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g027700.1 |
| Family | GH3 |
| Protein Properties | Length: 785 Molecular Weight: 84262.4 Isoelectric Point: 6.6321 |
| Chromosome | Chromosome/Scaffold: 4 Start: 57595719 End: 57600410 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 85 | 338 | 0 |
| AIPRLGVPAYKWWSEALHGVANAGRGIHLDGPLRAATSFPQVILTAASFNPHLWYRIGQVIGVEARAVYNNGQAEGLTFWAPNINVFRDPRWGRGQETPG EDPTMTGKYAAVFVRGVQGYGVAGPVNSTDLEASACCKHFTAYDLENWKGITRYVYDAKVTAQDLEDTYNPPFKSCVEDGHASGIMCSYNRVNGVPTCAD YNLLSKTARQSWGFYGYITSDCDAVSIIHDAQGYAKTSEDAVADVLKAGMDVNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 785 Download |
| MGGGRALSSL HVVHVATAAA ALLLAVLLQL HGGAASEPPY TCGAGAPPNI PFCDTALPID 60 RRVDDLVSRL TVAEKISQLG DESPAIPRLG VPAYKWWSEA LHGVANAGRG IHLDGPLRAA 120 TSFPQVILTA ASFNPHLWYR IGQVIGVEAR AVYNNGQAEG LTFWAPNINV FRDPRWGRGQ 180 ETPGEDPTMT GKYAAVFVRG VQGYGVAGPV NSTDLEASAC CKHFTAYDLE NWKGITRYVY 240 DAKVTAQDLE DTYNPPFKSC VEDGHASGIM CSYNRVNGVP TCADYNLLSK TARQSWGFYG 300 YITSDCDAVS IIHDAQGYAK TSEDAVADVL KAGMDVNCGG YVQKYGASAL QQGKITEQDI 360 NRALHNLFTV RMRLGLFNGD PRRNRYGNIG PDQVCTQEHQ DLALEAAQDG IVLLKNDGGA 420 LPLSKSGVAS LAVIGFNANN ATSLLGNYFG PPCVTVTPLQ VLQGYVKDTS FVAGCNSAAC 480 NVTTIPEAVQ AASSADSVVL FMGLDQNQER EEVDRLDLTL PGQQQTLIES VANAAKKPVI 540 LVLLCGGPVD VSFAKTNPKI GAILWAGYPG EAGGIAIAQV LFGEHNPGGR LPVTWYPQDF 600 TKVPMTDMRM RADPATGYPG RTYRFYRGPT VFNFGYGLSY SKYSHRFVTK PPPSMSNVAG 660 LKALATTAGG VATYDVEAIG SETCDRLKFP AVVRVQNHGP MDGKHPVLVF LRWPNATDGS 720 GRPARQLIGF QSLHLRATQT AHVEFEVSPC KHFSRATEDG RKVIDQGSHF VMVGDDEFEM 780 SFMA* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-55 | 411 | 641 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 2.0e-55 | 84 | 440 | 363 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 6.0e-63 | 71 | 363 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-74 | 51 | 749 | 784 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 36 | 781 | 755 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK38482.1 | 0 | 35 | 784 | 29 | 777 | beta-D-xylosidase [Hordeum vulgare] |
| GenBank | EEC74020.1 | 0 | 38 | 782 | 28 | 772 | hypothetical protein OsI_08964 [Oryza sativa Indica Group] |
| RefSeq | NP_001048140.1 | 0 | 45 | 782 | 39 | 778 | Os02g0752200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130324.1 | 0 | 4 | 784 | 3 | 780 | hypothetical protein LOC100191418 [Zea mays] |
| RefSeq | XP_002452540.1 | 0 | 1 | 784 | 1 | 784 | hypothetical protein SORBIDRAFT_04g027700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 121 | 781 | 91 | 729 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u48_A | 0 | 121 | 781 | 91 | 729 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u4a_B | 0 | 121 | 781 | 91 | 729 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3u4a_A | 0 | 121 | 781 | 91 | 729 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 2x41_A | 6.99949e-42 | 62 | 774 | 3 | 699 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
