| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g028340.1 |
| Family | AA2 |
| Protein Properties | Length: 367 Molecular Weight: 39446.3 Isoelectric Point: 6.5048 |
| Chromosome | Chromosome/Scaffold: 4 Start: 58435957 End: 58437456 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 61 | 328 | 0 |
| TKQMANPTTAAGVLRVFFHDCFVSGCDASVLIASTQFQKSEHDAEINHSLPGDAFDAVVRAKLALELECPGVVSCADILALASGVLVTMTGGPRYPIPLG RRDSLSSSPTAPDIELPHSNFTMDRLIQMFGAKGFTVQELVALSGAHTLGFSHCNEFANRLYNFRNQGGKPEPFDPSMNPSYARGLQDVCKNYLKDPTIA AFNDIMTPGKFDNMYFVNLERGLGLLSTDEELWTDPRTKPLVQLYASNPAAFFTDFGRAMEKLSLYGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 367 Download |
| MHQHEIPAIM RLSLLLLLVA ALTARAAAQL PAPAGGGALK PDFYSQSCPR AERIIAEVMQ 60 TKQMANPTTA AGVLRVFFHD CFVSGCDASV LIASTQFQKS EHDAEINHSL PGDAFDAVVR 120 AKLALELECP GVVSCADILA LASGVLVTMT GGPRYPIPLG RRDSLSSSPT APDIELPHSN 180 FTMDRLIQMF GAKGFTVQEL VALSGAHTLG FSHCNEFANR LYNFRNQGGK PEPFDPSMNP 240 SYARGLQDVC KNYLKDPTIA AFNDIMTPGK FDNMYFVNLE RGLGLLSTDE ELWTDPRTKP 300 LVQLYASNPA AFFTDFGRAM EKLSLYGVKT GADGEVRRRC DAYNSGPAIP GALGGGGAMP 360 MPMPKM* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 8.0e-6 | 277 | 308 | 32 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 8.0e-29 | 133 | 329 | 205 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 9.0e-57 | 55 | 208 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 5.0e-79 | 43 | 344 | 309 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 3.0e-154 | 42 | 343 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF83301.1 | 0 | 1 | 366 | 1 | 360 | unknown [Zea mays] |
| GenBank | EAZ24568.1 | 0 | 33 | 347 | 120 | 431 | hypothetical protein OsJ_08330 [Oryza sativa Japonica Group] |
| RefSeq | NP_001148668.1 | 0 | 1 | 353 | 1 | 351 | LOC100282284 [Zea mays] |
| RefSeq | NP_001151254.1 | 0 | 1 | 351 | 1 | 351 | peroxidase 65 [Zea mays] |
| RefSeq | XP_002454306.1 | 0 | 1 | 366 | 1 | 366 | hypothetical protein SORBIDRAFT_04g028340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 39 | 345 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1sch_B | 0 | 39 | 344 | 2 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 39 | 344 | 2 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1qo4_A | 0 | 39 | 344 | 3 | 304 | A Chain A, Peanut Peroxidase |
| PDB | 1pa2_A | 0 | 39 | 344 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
