y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb04g034100.1 |
Family | GT37 |
Protein Properties | Length: 559 Molecular Weight: 63809.9 Isoelectric Point: 7.6578 |
Chromosome | Chromosome/Scaffold: 4 Start: 63963059 End: 63967843 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 56 | 527 | 0 |
QDDMSDDLSPSPQIAYDRLLGGLLVEGFDEKSCRSRYQFARYHNSPSIPSAYLIERLRKQEALQKKCGPGTKAYKEASKQLKYGQSINTTDCNYLYLIIH AGLGNRMLEITSAFLYALLTNRILLVDRYKEIADLFCEPFPGTSWLVPSDFPLNNDEFSQTSPESYGNMLQNKVFGGNTDRSLAGNRPPYVYLHLDGTYG FHDKLFFCEDDQQFLQEVSWLIMRTDMYFVPSLFLIPAFQDELSRLFPEKDTVFHHLARYLFHPTNNVWYSVTKYFRSYLAKAEKRVGIQIRIYETKGIL QRNGPFPHILNQILSCAQNEKLLPEVSMAEGAAAETQNNRTAAGTQNNRTIAVLTTSLSSWYSDQIQKKYDEQPAVDGITVKVFQPSHEEYQRSRNKKHN MKALAEIYLLSMSDELITSGFSTFGYAAQGLAGLKPWIMFKSENHVMPDPPCGRAMSIEPCFHQAPFYDCKA |
Full Sequence |
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Protein Sequence Length: 559 Download |
MALQRWWLVR VLVLCLLCGA CAAAKQRYLS VSMDEELLRS KQAHLDCPPW KKSDIQDDMS 60 DDLSPSPQIA YDRLLGGLLV EGFDEKSCRS RYQFARYHNS PSIPSAYLIE RLRKQEALQK 120 KCGPGTKAYK EASKQLKYGQ SINTTDCNYL YLIIHAGLGN RMLEITSAFL YALLTNRILL 180 VDRYKEIADL FCEPFPGTSW LVPSDFPLNN DEFSQTSPES YGNMLQNKVF GGNTDRSLAG 240 NRPPYVYLHL DGTYGFHDKL FFCEDDQQFL QEVSWLIMRT DMYFVPSLFL IPAFQDELSR 300 LFPEKDTVFH HLARYLFHPT NNVWYSVTKY FRSYLAKAEK RVGIQIRIYE TKGILQRNGP 360 FPHILNQILS CAQNEKLLPE VSMAEGAAAE TQNNRTAAGT QNNRTIAVLT TSLSSWYSDQ 420 IQKKYDEQPA VDGITVKVFQ PSHEEYQRSR NKKHNMKALA EIYLLSMSDE LITSGFSTFG 480 YAAQGLAGLK PWIMFKSENH VMPDPPCGRA MSIEPCFHQA PFYDCKAKKD ADLGKVVPYV 540 RHCEDVSWGL KIVNQTHL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 4.0e-10 | 155 | 486 | 342 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 58 | 527 | 472 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC74050.1 | 0 | 52 | 557 | 32 | 532 | hypothetical protein OsI_09046 [Oryza sativa Indica Group] |
GenBank | EEE57854.1 | 0 | 52 | 551 | 32 | 526 | hypothetical protein OsJ_08490 [Oryza sativa Japonica Group] |
RefSeq | NP_001048212.1 | 0 | 52 | 557 | 32 | 532 | Os02g0763900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142272.1 | 0 | 63 | 558 | 103 | 604 | hypothetical protein LOC100274441 [Zea mays] |
RefSeq | XP_002452877.1 | 0 | 1 | 558 | 1 | 558 | hypothetical protein SORBIDRAFT_04g034100 [Sorghum bicolor] |