| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb04g034200.1 |
| Family | GH5 |
| Protein Properties | Length: 412 Molecular Weight: 44726.4 Isoelectric Point: 7.2673 |
| Chromosome | Chromosome/Scaffold: 4 Start: 64035883 End: 64037775 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 50 | 370 | 3.7e-33 |
| GRPFYSNGFNAYWLMYMASDPADRSKATAALDEAARVGATLVRTWAFSDGGYRALQVSPGVYNEQVFRGLDYVISEAKKRGIHLILSLVNNWDGYGGKKQ YVQWARTQGHNLNSDDDFFTNSVTKGFYKNHAVLTRVNKITGVAYKDDPTIFAWELMNEPRCQSDLSGKALQAWITEMAGYVKSVDPNHMVEIGLEGFYG ESTPDRTHKFNPGGYAVGTDFISNNLIPGIDFATIHSYPDQWVPGASNDAQVAFMRRWMASHAGDAAAVLRKPLLVAEFGWSARSNGYTVSMRDAYFRMV YDAIYASASAGGPLAGGLFWQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 412 Download |
| MASRRAILLG LAVLSLAAAA FVRTAGHGAG ELAGNAAFAK ASGTRFTLGG RPFYSNGFNA 60 YWLMYMASDP ADRSKATAAL DEAARVGATL VRTWAFSDGG YRALQVSPGV YNEQVFRGLD 120 YVISEAKKRG IHLILSLVNN WDGYGGKKQY VQWARTQGHN LNSDDDFFTN SVTKGFYKNH 180 AVLTRVNKIT GVAYKDDPTI FAWELMNEPR CQSDLSGKAL QAWITEMAGY VKSVDPNHMV 240 EIGLEGFYGE STPDRTHKFN PGGYAVGTDF ISNNLIPGID FATIHSYPDQ WVPGASNDAQ 300 VAFMRRWMAS HAGDAAAVLR KPLLVAEFGW SARSNGYTVS MRDAYFRMVY DAIYASASAG 360 GPLAGGLFWQ VMVPGMESWT DGYDVVLDRS PSTADVVSQE CARITGLNQV S* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 2.0e-6 | 50 | 337 | 301 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 4.0e-24 | 46 | 345 | 308 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABC87082.1 | 0 | 32 | 407 | 1 | 378 | 1,4-beta-D-mannan endohydrolase precursor [Hordeum vulgare subsp. vulgare] |
| GenBank | ACG41070.1 | 0 | 3 | 408 | 4 | 406 | 1,4-beta-D-mannan endohydrolase precursor [Zea mays] |
| RefSeq | NP_001048226.1 | 0 | 35 | 408 | 36 | 396 | Os02g0766900 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q6Z310 | 0 | 35 | 408 | 36 | 405 | MAN9_ORYSJ RecName: Full=Putative mannan endo-1,4-beta-mannosidase 9; AltName: Full=Beta-mannanase 9; AltName: Full=Endo-beta-1,4-mannanase 9; AltName: Full=OsMan9; AltName: Full=OsMANP; Flags: Precursor |
| RefSeq | XP_002454605.1 | 0 | 1 | 411 | 1 | 411 | hypothetical protein SORBIDRAFT_04g034200 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 35 | 407 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 48 | 399 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 48 | 399 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 48 | 399 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 48 | 399 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
